Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Rpap1Q80TE0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Rpap1Q80TE0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rpap1Q80TE0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Rpap1Q80TE0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
Rpap1Q80TE0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Gm10657-201ENSMUST00000193528 1031 ntBASIC33.11■■■□□ 2.89
Rpap1Q80TE0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Gm8493-201ENSMUST00000196881 489 ntBASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Gm43173-201ENSMUST00000202246 593 ntBASIC33.09■■■□□ 2.89
Rpap1Q80TE0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Rpap1Q80TE0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Rpap1Q80TE0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Gm12251-201ENSMUST00000117893 792 ntBASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Rpap1Q80TE0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Rpap1Q80TE0 Gm5874-201ENSMUST00000096101 508 ntBASIC33.07■■■□□ 2.88
Rpap1Q80TE0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rpap1Q80TE0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rpap1Q80TE0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rpap1Q80TE0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC33.04■■■□□ 2.88
Rpap1Q80TE0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
Rpap1Q80TE0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Gm8770-201ENSMUST00000121113 1109 ntBASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Wdr70-203ENSMUST00000227371 1130 ntBASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.88
Rpap1Q80TE0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Rpap1Q80TE0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC33■■■□□ 2.87
Rpap1Q80TE0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Rpap1Q80TE0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC33■■■□□ 2.87
Rpap1Q80TE0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Gm7143-201ENSMUST00000222811 859 ntBASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC32.98■■■□□ 2.87
Rpap1Q80TE0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
Rpap1Q80TE0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC32.98■■■□□ 2.87
Rpap1Q80TE0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
Rpap1Q80TE0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Rpap1Q80TE0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC32.96■■■□□ 2.87
Rpap1Q80TE0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC32.95■■■□□ 2.87
Rpap1Q80TE0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC32.95■■■□□ 2.87
Rpap1Q80TE0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Rpap1Q80TE0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Gm5576-201ENSMUST00000075809 1236 ntBASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC32.93■■■□□ 2.86
Rpap1Q80TE0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms