Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.64■□□□□ 0.73
Rnf220Q6PDX6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rnf220Q6PDX6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf220Q6PDX6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf220Q6PDX6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf220Q6PDX6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf220Q6PDX6 Mir3960-201ENSMUST00000198213 73 ntBASIC19.63■□□□□ 0.73
Rnf220Q6PDX6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rnf220Q6PDX6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf220Q6PDX6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf220Q6PDX6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf220Q6PDX6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf220Q6PDX6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf220Q6PDX6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rnf220Q6PDX6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf220Q6PDX6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf220Q6PDX6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.6■□□□□ 0.73
Rnf220Q6PDX6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf220Q6PDX6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf220Q6PDX6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf220Q6PDX6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf220Q6PDX6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf220Q6PDX6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf220Q6PDX6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf220Q6PDX6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf220Q6PDX6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.59■□□□□ 0.73
Rnf220Q6PDX6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Rnf220Q6PDX6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.58■□□□□ 0.73
Rnf220Q6PDX6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf220Q6PDX6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf220Q6PDX6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf220Q6PDX6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf220Q6PDX6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.58■□□□□ 0.72
Rnf220Q6PDX6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.58■□□□□ 0.72
Rnf220Q6PDX6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.58■□□□□ 0.72
Rnf220Q6PDX6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf220Q6PDX6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Gm45364-201ENSMUST00000210883 159 ntBASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf220Q6PDX6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf220Q6PDX6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf220Q6PDX6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf220Q6PDX6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf220Q6PDX6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf220Q6PDX6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf220Q6PDX6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf220Q6PDX6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf220Q6PDX6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf220Q6PDX6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf220Q6PDX6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf220Q6PDX6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf220Q6PDX6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.54■□□□□ 0.72
Rnf220Q6PDX6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf220Q6PDX6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf220Q6PDX6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf220Q6PDX6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Terc-201ENSMUST00000082862 423 ntBASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.53■□□□□ 0.72
Rnf220Q6PDX6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rnf220Q6PDX6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms