Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarb1Q61009 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scarb1Q61009 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarb1Q61009 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarb1Q61009 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarb1Q61009 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarb1Q61009 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarb1Q61009 Gm44428-201ENSMUST00000204474 874 ntBASIC17.52■□□□□ 0.4
Scarb1Q61009 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarb1Q61009 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Scarb1Q61009 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scarb1Q61009 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb1Q61009 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Scarb1Q61009 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb1Q61009 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb1Q61009 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb1Q61009 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scarb1Q61009 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scarb1Q61009 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb1Q61009 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb1Q61009 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb1Q61009 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scarb1Q61009 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scarb1Q61009 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.49■□□□□ 0.39
Scarb1Q61009 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scarb1Q61009 Golph3-202ENSMUST00000226517 2359 ntBASIC17.48■□□□□ 0.39
Scarb1Q61009 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb1Q61009 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb1Q61009 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.48■□□□□ 0.39
Scarb1Q61009 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb1Q61009 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scarb1Q61009 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb1Q61009 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.47■□□□□ 0.39
Scarb1Q61009 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb1Q61009 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb1Q61009 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb1Q61009 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scarb1Q61009 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb1Q61009 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb1Q61009 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.46■□□□□ 0.39
Scarb1Q61009 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb1Q61009 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.46■□□□□ 0.39
Scarb1Q61009 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb1Q61009 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb1Q61009 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scarb1Q61009 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Scarb1Q61009 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scarb1Q61009 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Scarb1Q61009 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.45■□□□□ 0.38
Scarb1Q61009 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scarb1Q61009 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scarb1Q61009 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scarb1Q61009 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Scarb1Q61009 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scarb1Q61009 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.44■□□□□ 0.38
Scarb1Q61009 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb1Q61009 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.43■□□□□ 0.38
Scarb1Q61009 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.43■□□□□ 0.38
Scarb1Q61009 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb1Q61009 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scarb1Q61009 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb1Q61009 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb1Q61009 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb1Q61009 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb1Q61009 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scarb1Q61009 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scarb1Q61009 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scarb1Q61009 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Scarb1Q61009 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.42■□□□□ 0.38
Scarb1Q61009 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scarb1Q61009 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms