Protein–RNA interactions for Protein: Q60846

Tnfrsf8, Tumor necrosis factor receptor superfamily member 8, mousemouse

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf8Q60846 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf8Q60846 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf8Q60846 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf8Q60846 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tnfrsf8Q60846 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf8Q60846 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf8Q60846 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf8Q60846 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf8Q60846 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf8Q60846 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf8Q60846 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf8Q60846 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf8Q60846 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf8Q60846 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf8Q60846 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf8Q60846 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf8Q60846 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.7■□□□□ 0.74
Tnfrsf8Q60846 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf8Q60846 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf8Q60846 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf8Q60846 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf8Q60846 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf8Q60846 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf8Q60846 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf8Q60846 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf8Q60846 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf8Q60846 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf8Q60846 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.66■□□□□ 0.74
Tnfrsf8Q60846 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf8Q60846 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnfrsf8Q60846 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf8Q60846 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf8Q60846 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf8Q60846 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf8Q60846 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf8Q60846 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.64■□□□□ 0.73
Tnfrsf8Q60846 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf8Q60846 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf8Q60846 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.63■□□□□ 0.73
Tnfrsf8Q60846 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.63■□□□□ 0.73
Tnfrsf8Q60846 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf8Q60846 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Tnfrsf8Q60846 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf8Q60846 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf8Q60846 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf8Q60846 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.62■□□□□ 0.73
Tnfrsf8Q60846 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf8Q60846 Gm12922-201ENSMUST00000120626 809 ntBASIC19.62■□□□□ 0.73
Tnfrsf8Q60846 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms