Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Psmc4P54775 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Psmc4P54775 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.83■■□□□ 1.41
Psmc4P54775 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Psmc4P54775 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Psmc4P54775 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Psmc4P54775 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.82■■□□□ 1.4
Psmc4P54775 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Psmc4P54775 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Psmc4P54775 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.81■■□□□ 1.4
Psmc4P54775 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.81■■□□□ 1.4
Psmc4P54775 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Psmc4P54775 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Psmc4P54775 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Psmc4P54775 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Psmc4P54775 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Psmc4P54775 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Psmc4P54775 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Psmc4P54775 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Psmc4P54775 Gm8493-201ENSMUST00000196881 489 ntBASIC23.79■■□□□ 1.4
Psmc4P54775 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Psmc4P54775 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Psmc4P54775 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Psmc4P54775 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Psmc4P54775 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Psmc4P54775 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Psmc4P54775 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.78■■□□□ 1.4
Psmc4P54775 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.78■■□□□ 1.4
Psmc4P54775 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Psmc4P54775 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Psmc4P54775 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Psmc4P54775 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Psmc4P54775 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.77■■□□□ 1.4
Psmc4P54775 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Psmc4P54775 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.76■■□□□ 1.39
Psmc4P54775 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Psmc4P54775 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Psmc4P54775 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Psmc4P54775 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.76■■□□□ 1.39
Psmc4P54775 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.76■■□□□ 1.39
Psmc4P54775 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Psmc4P54775 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Psmc4P54775 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Psmc4P54775 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.76■■□□□ 1.39
Psmc4P54775 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Psmc4P54775 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Psmc4P54775 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.75■■□□□ 1.39
Psmc4P54775 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Psmc4P54775 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Psmc4P54775 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Psmc4P54775 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.74■■□□□ 1.39
Psmc4P54775 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Psmc4P54775 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Psmc4P54775 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Psmc4P54775 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.73■■□□□ 1.39
Psmc4P54775 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Psmc4P54775 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Psmc4P54775 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.72■■□□□ 1.39
Psmc4P54775 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Psmc4P54775 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Psmc4P54775 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Psmc4P54775 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Psmc4P54775 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Psmc4P54775 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Psmc4P54775 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Psmc4P54775 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Psmc4P54775 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
Psmc4P54775 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.7■■□□□ 1.38
Psmc4P54775 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Psmc4P54775 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Psmc4P54775 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
Psmc4P54775 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Psmc4P54775 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.69■■□□□ 1.38
Psmc4P54775 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Psmc4P54775 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Psmc4P54775 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.68■■□□□ 1.38
Psmc4P54775 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Psmc4P54775 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Psmc4P54775 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Psmc4P54775 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.68■■□□□ 1.38
Psmc4P54775 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.68■■□□□ 1.38
Psmc4P54775 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Psmc4P54775 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Psmc4P54775 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Psmc4P54775 Gm7291-201ENSMUST00000199147 382 ntBASIC23.67■■□□□ 1.38
Psmc4P54775 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.67■■□□□ 1.38
Psmc4P54775 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Psmc4P54775 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.67■■□□□ 1.38
Psmc4P54775 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Psmc4P54775 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Psmc4P54775 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Psmc4P54775 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Psmc4P54775 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms