Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sftpa1P35242 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sftpa1P35242 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Sftpa1P35242 Gm8493-201ENSMUST00000196881 489 ntBASIC19.48■□□□□ 0.71
Sftpa1P35242 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sftpa1P35242 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sftpa1P35242 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sftpa1P35242 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.48■□□□□ 0.71
Sftpa1P35242 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.48■□□□□ 0.71
Sftpa1P35242 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sftpa1P35242 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sftpa1P35242 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sftpa1P35242 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sftpa1P35242 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sftpa1P35242 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sftpa1P35242 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sftpa1P35242 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sftpa1P35242 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.46■□□□□ 0.71
Sftpa1P35242 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Sftpa1P35242 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sftpa1P35242 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sftpa1P35242 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sftpa1P35242 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sftpa1P35242 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sftpa1P35242 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sftpa1P35242 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.45■□□□□ 0.7
Sftpa1P35242 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.45■□□□□ 0.7
Sftpa1P35242 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.45■□□□□ 0.7
Sftpa1P35242 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sftpa1P35242 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sftpa1P35242 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Sftpa1P35242 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sftpa1P35242 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.44■□□□□ 0.7
Sftpa1P35242 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sftpa1P35242 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sftpa1P35242 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.43■□□□□ 0.7
Sftpa1P35242 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sftpa1P35242 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sftpa1P35242 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sftpa1P35242 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
Sftpa1P35242 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sftpa1P35242 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sftpa1P35242 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.41■□□□□ 0.7
Sftpa1P35242 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sftpa1P35242 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sftpa1P35242 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sftpa1P35242 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sftpa1P35242 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sftpa1P35242 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sftpa1P35242 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Sftpa1P35242 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sftpa1P35242 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sftpa1P35242 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sftpa1P35242 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.4■□□□□ 0.7
Sftpa1P35242 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.4■□□□□ 0.7
Sftpa1P35242 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sftpa1P35242 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sftpa1P35242 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sftpa1P35242 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sftpa1P35242 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sftpa1P35242 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.39■□□□□ 0.69
Sftpa1P35242 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.39■□□□□ 0.69
Sftpa1P35242 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sftpa1P35242 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sftpa1P35242 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sftpa1P35242 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sftpa1P35242 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.38■□□□□ 0.69
Sftpa1P35242 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sftpa1P35242 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.38■□□□□ 0.69
Sftpa1P35242 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sftpa1P35242 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sftpa1P35242 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Sftpa1P35242 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sftpa1P35242 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sftpa1P35242 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sftpa1P35242 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sftpa1P35242 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Sftpa1P35242 Gm43173-201ENSMUST00000202246 593 ntBASIC19.37■□□□□ 0.69
Sftpa1P35242 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.37■□□□□ 0.69
Sftpa1P35242 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.37■□□□□ 0.69
Sftpa1P35242 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sftpa1P35242 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sftpa1P35242 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sftpa1P35242 Gm12251-201ENSMUST00000117893 792 ntBASIC19.36■□□□□ 0.69
Sftpa1P35242 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms