Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VtnP29788 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VtnP29788 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.93■□□□□ 0.62
VtnP29788 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
VtnP29788 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VtnP29788 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VtnP29788 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.92■□□□□ 0.62
VtnP29788 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VtnP29788 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VtnP29788 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VtnP29788 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VtnP29788 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
VtnP29788 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VtnP29788 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VtnP29788 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.91■□□□□ 0.62
VtnP29788 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.91■□□□□ 0.62
VtnP29788 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.91■□□□□ 0.62
VtnP29788 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
VtnP29788 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VtnP29788 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
VtnP29788 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.9■□□□□ 0.62
VtnP29788 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.9■□□□□ 0.62
VtnP29788 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.9■□□□□ 0.62
VtnP29788 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VtnP29788 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.9■□□□□ 0.62
VtnP29788 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.9■□□□□ 0.62
VtnP29788 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VtnP29788 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VtnP29788 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VtnP29788 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VtnP29788 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
VtnP29788 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
VtnP29788 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.89■□□□□ 0.62
VtnP29788 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VtnP29788 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.89■□□□□ 0.61
VtnP29788 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.89■□□□□ 0.61
VtnP29788 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.89■□□□□ 0.61
VtnP29788 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VtnP29788 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VtnP29788 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VtnP29788 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
VtnP29788 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
VtnP29788 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.88■□□□□ 0.61
VtnP29788 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VtnP29788 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
VtnP29788 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VtnP29788 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.88■□□□□ 0.61
VtnP29788 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VtnP29788 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VtnP29788 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VtnP29788 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
VtnP29788 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VtnP29788 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.87■□□□□ 0.61
VtnP29788 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.87■□□□□ 0.61
VtnP29788 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.87■□□□□ 0.61
VtnP29788 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
VtnP29788 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VtnP29788 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
VtnP29788 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VtnP29788 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VtnP29788 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.86■□□□□ 0.61
VtnP29788 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VtnP29788 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VtnP29788 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VtnP29788 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VtnP29788 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VtnP29788 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VtnP29788 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VtnP29788 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VtnP29788 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VtnP29788 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VtnP29788 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.85■□□□□ 0.61
VtnP29788 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VtnP29788 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VtnP29788 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.84■□□□□ 0.61
VtnP29788 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.84■□□□□ 0.61
VtnP29788 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.84■□□□□ 0.61
VtnP29788 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VtnP29788 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VtnP29788 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VtnP29788 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VtnP29788 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.83■□□□□ 0.6
VtnP29788 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VtnP29788 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VtnP29788 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VtnP29788 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VtnP29788 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.82■□□□□ 0.6
VtnP29788 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.82■□□□□ 0.6
VtnP29788 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.82■□□□□ 0.6
VtnP29788 Gm10399-202ENSMUST00000202768 748 ntBASIC18.82■□□□□ 0.6
VtnP29788 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VtnP29788 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms