Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Best1O88870 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Best1O88870 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Best1O88870 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Best1O88870 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Best1O88870 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Best1O88870 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Best1O88870 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Best1O88870 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Best1O88870 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.27■□□□□ 0.83
Best1O88870 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.26■□□□□ 0.83
Best1O88870 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Best1O88870 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.26■□□□□ 0.83
Best1O88870 Gm9870-201ENSMUST00000063874 645 ntBASIC20.26■□□□□ 0.83
Best1O88870 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.26■□□□□ 0.83
Best1O88870 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Best1O88870 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Best1O88870 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Best1O88870 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.25■□□□□ 0.83
Best1O88870 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Best1O88870 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Best1O88870 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Best1O88870 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Best1O88870 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.24■□□□□ 0.83
Best1O88870 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.24■□□□□ 0.83
Best1O88870 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.24■□□□□ 0.83
Best1O88870 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.24■□□□□ 0.83
Best1O88870 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Best1O88870 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Best1O88870 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Best1O88870 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Best1O88870 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Best1O88870 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Best1O88870 Golgb1-201ENSMUST00000023534 498 ntBASIC20.23■□□□□ 0.83
Best1O88870 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Best1O88870 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Best1O88870 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Best1O88870 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Best1O88870 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Best1O88870 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Best1O88870 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Best1O88870 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Best1O88870 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Best1O88870 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Best1O88870 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Best1O88870 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Best1O88870 Gm7143-201ENSMUST00000222811 859 ntBASIC20.21■□□□□ 0.83
Best1O88870 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Best1O88870 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Best1O88870 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Best1O88870 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Best1O88870 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Best1O88870 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Best1O88870 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
Best1O88870 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Best1O88870 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Best1O88870 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.2■□□□□ 0.82
Best1O88870 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Best1O88870 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Best1O88870 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Best1O88870 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Best1O88870 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Best1O88870 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Best1O88870 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Best1O88870 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.19■□□□□ 0.82
Best1O88870 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.19■□□□□ 0.82
Best1O88870 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Best1O88870 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Best1O88870 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Best1O88870 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.18■□□□□ 0.82
Best1O88870 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Best1O88870 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Best1O88870 Gm21956-201ENSMUST00000179946 522 ntBASIC20.18■□□□□ 0.82
Best1O88870 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Best1O88870 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Best1O88870 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.17■□□□□ 0.82
Best1O88870 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Best1O88870 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.16■□□□□ 0.82
Best1O88870 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.16■□□□□ 0.82
Best1O88870 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.16■□□□□ 0.82
Best1O88870 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.16■□□□□ 0.82
Best1O88870 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Best1O88870 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Best1O88870 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Best1O88870 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms