Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.41■■□□□ 1.02
Usp2O88623 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usp2O88623 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Usp2O88623 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp2O88623 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usp2O88623 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Usp2O88623 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Usp2O88623 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Usp2O88623 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp2O88623 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp2O88623 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp2O88623 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.39■■□□□ 1.01
Usp2O88623 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.39■■□□□ 1.01
Usp2O88623 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Usp2O88623 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Usp2O88623 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.39■■□□□ 1.01
Usp2O88623 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp2O88623 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp2O88623 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp2O88623 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp2O88623 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Usp2O88623 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Usp2O88623 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp2O88623 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.36■■□□□ 1.01
Usp2O88623 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp2O88623 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Usp2O88623 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp2O88623 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp2O88623 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp2O88623 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Usp2O88623 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Usp2O88623 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp2O88623 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp2O88623 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
Usp2O88623 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.35■■□□□ 1.01
Usp2O88623 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Usp2O88623 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp2O88623 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp2O88623 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp2O88623 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp2O88623 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.34■■□□□ 1.01
Usp2O88623 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp2O88623 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp2O88623 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp2O88623 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Usp2O88623 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp2O88623 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Usp2O88623 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Usp2O88623 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp2O88623 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp2O88623 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.33■■□□□ 1
Usp2O88623 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp2O88623 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Usp2O88623 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Gm21956-201ENSMUST00000179946 522 ntBASIC21.32■■□□□ 1
Usp2O88623 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.32■■□□□ 1
Usp2O88623 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp2O88623 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp2O88623 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp2O88623 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp2O88623 Gm9847-201ENSMUST00000052528 599 ntBASIC21.31■■□□□ 1
Usp2O88623 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp2O88623 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.3■■□□□ 1
Usp2O88623 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp2O88623 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp2O88623 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp2O88623 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp2O88623 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.29■■□□□ 1
Usp2O88623 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp2O88623 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.29■■□□□ 1
Usp2O88623 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Usp2O88623 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp2O88623 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp2O88623 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp2O88623 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp2O88623 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.28■■□□□ 1
Usp2O88623 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp2O88623 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.28■■□□□ 1
Usp2O88623 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp2O88623 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Usp2O88623 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Usp2O88623 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp2O88623 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.28■■□□□ 1
Usp2O88623 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms