Protein–RNA interactions for Protein: F7BCN0

Gm28048, Predicted gene, 28048 (Fragment), mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28048F7BCN0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28048F7BCN0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28048F7BCN0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm28048F7BCN0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm28048F7BCN0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm28048F7BCN0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28048F7BCN0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm28048F7BCN0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm28048F7BCN0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Gm28048F7BCN0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm28048F7BCN0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.27■□□□□ 0.67
Gm28048F7BCN0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.26■□□□□ 0.67
Gm28048F7BCN0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28048F7BCN0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28048F7BCN0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gm28048F7BCN0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28048F7BCN0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.24■□□□□ 0.67
Gm28048F7BCN0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28048F7BCN0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm28048F7BCN0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28048F7BCN0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Gm28048F7BCN0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Gm28048F7BCN0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28048F7BCN0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28048F7BCN0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28048F7BCN0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28048F7BCN0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28048F7BCN0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm28048F7BCN0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28048F7BCN0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28048F7BCN0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28048F7BCN0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm28048F7BCN0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gm28048F7BCN0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm28048F7BCN0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms