Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Hfm1D3Z4R1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Hfm1D3Z4R1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Hfm1D3Z4R1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Hfm1D3Z4R1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC30.17■■■□□ 2.42
Hfm1D3Z4R1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Hfm1D3Z4R1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Hfm1D3Z4R1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Hfm1D3Z4R1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Hfm1D3Z4R1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Hfm1D3Z4R1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC30.16■■■□□ 2.42
Hfm1D3Z4R1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Hfm1D3Z4R1 Gm5576-201ENSMUST00000075809 1236 ntBASIC30.16■■■□□ 2.42
Hfm1D3Z4R1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Hfm1D3Z4R1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Hfm1D3Z4R1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Hfm1D3Z4R1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC30.14■■■□□ 2.42
Hfm1D3Z4R1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
Hfm1D3Z4R1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Gm7291-201ENSMUST00000199147 382 ntBASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Hfm1D3Z4R1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Hfm1D3Z4R1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Hfm1D3Z4R1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC30.11■■■□□ 2.41
Hfm1D3Z4R1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC30.11■■■□□ 2.41
Hfm1D3Z4R1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Hfm1D3Z4R1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Hfm1D3Z4R1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Hfm1D3Z4R1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Hfm1D3Z4R1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Hfm1D3Z4R1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Hfm1D3Z4R1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Hfm1D3Z4R1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC30.09■■■□□ 2.41
Hfm1D3Z4R1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC30.09■■■□□ 2.41
Hfm1D3Z4R1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Hfm1D3Z4R1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Hfm1D3Z4R1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC30.08■■■□□ 2.41
Hfm1D3Z4R1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hfm1D3Z4R1 Gm26571-201ENSMUST00000181399 666 ntBASIC30.07■■■□□ 2.4
Hfm1D3Z4R1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Hfm1D3Z4R1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hfm1D3Z4R1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hfm1D3Z4R1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hfm1D3Z4R1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Hfm1D3Z4R1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
Hfm1D3Z4R1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Hfm1D3Z4R1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
Hfm1D3Z4R1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hfm1D3Z4R1 Gm43759-201ENSMUST00000196925 1261 ntBASIC30.05■■■□□ 2.4
Hfm1D3Z4R1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Hfm1D3Z4R1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC30.05■■■□□ 2.4
Hfm1D3Z4R1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hfm1D3Z4R1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hfm1D3Z4R1 Gm7143-201ENSMUST00000222811 859 ntBASIC30.05■■■□□ 2.4
Hfm1D3Z4R1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC30.04■■■□□ 2.4
Hfm1D3Z4R1 Gm10849-201ENSMUST00000100397 618 ntBASIC30.04■■■□□ 2.4
Hfm1D3Z4R1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Hfm1D3Z4R1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hfm1D3Z4R1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hfm1D3Z4R1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Hfm1D3Z4R1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hfm1D3Z4R1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hfm1D3Z4R1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC30.02■■■□□ 2.4
Hfm1D3Z4R1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hfm1D3Z4R1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Hfm1D3Z4R1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hfm1D3Z4R1 Gm4430-201ENSMUST00000192413 1943 ntBASIC30.02■■■□□ 2.4
Hfm1D3Z4R1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hfm1D3Z4R1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC30.01■■■□□ 2.39
Hfm1D3Z4R1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Hfm1D3Z4R1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
Hfm1D3Z4R1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Hfm1D3Z4R1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Hfm1D3Z4R1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Hfm1D3Z4R1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC30■■■□□ 2.39
Hfm1D3Z4R1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Hfm1D3Z4R1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
Hfm1D3Z4R1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC30■■■□□ 2.39
Hfm1D3Z4R1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Hfm1D3Z4R1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Hfm1D3Z4R1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hfm1D3Z4R1 Gm27405-201ENSMUST00000184201 112 ntBASIC29.98■■■□□ 2.39
Hfm1D3Z4R1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hfm1D3Z4R1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hfm1D3Z4R1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hfm1D3Z4R1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hfm1D3Z4R1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hfm1D3Z4R1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC29.97■■■□□ 2.39
Hfm1D3Z4R1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Hfm1D3Z4R1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Hfm1D3Z4R1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC29.96■■■□□ 2.39
Hfm1D3Z4R1 Spcs1-207ENSMUST00000228767 1008 ntBASIC29.96■■■□□ 2.39
Hfm1D3Z4R1 Gm6085-201ENSMUST00000182774 1470 ntBASIC29.96■■■□□ 2.39
Hfm1D3Z4R1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms