Protein–RNA interactions for Protein: Q9ESC8

Aff4, AF4/FMR2 family member 4, mousemouse

Predictions only

Length 1,160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff4Q9ESC8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Aff4Q9ESC8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aff4Q9ESC8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Aff4Q9ESC8 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.89■□□□□ 0.93
Aff4Q9ESC8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Aff4Q9ESC8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Aff4Q9ESC8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Aff4Q9ESC8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Aff4Q9ESC8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Aff4Q9ESC8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Aff4Q9ESC8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.87■□□□□ 0.93
Aff4Q9ESC8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Aff4Q9ESC8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Aff4Q9ESC8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Aff4Q9ESC8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Aff4Q9ESC8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aff4Q9ESC8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Aff4Q9ESC8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aff4Q9ESC8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Aff4Q9ESC8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Aff4Q9ESC8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Aff4Q9ESC8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Aff4Q9ESC8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Aff4Q9ESC8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Aff4Q9ESC8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Aff4Q9ESC8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Aff4Q9ESC8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Aff4Q9ESC8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Aff4Q9ESC8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Aff4Q9ESC8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aff4Q9ESC8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
Aff4Q9ESC8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Aff4Q9ESC8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aff4Q9ESC8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aff4Q9ESC8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.8■□□□□ 0.92
Aff4Q9ESC8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aff4Q9ESC8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aff4Q9ESC8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.79■□□□□ 0.92
Aff4Q9ESC8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.79■□□□□ 0.92
Aff4Q9ESC8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Aff4Q9ESC8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.78■□□□□ 0.92
Aff4Q9ESC8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aff4Q9ESC8 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.78■□□□□ 0.92
Aff4Q9ESC8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Aff4Q9ESC8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Aff4Q9ESC8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.78■□□□□ 0.92
Aff4Q9ESC8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Aff4Q9ESC8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Aff4Q9ESC8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.77■□□□□ 0.92
Aff4Q9ESC8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Aff4Q9ESC8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Aff4Q9ESC8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Aff4Q9ESC8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.77■□□□□ 0.92
Aff4Q9ESC8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 139.6 ms