Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Gm5921-201ENSMUST00000075898 882 ntBASIC21.32■■□□□ 1
Ndc80Q9D0F1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndc80Q9D0F1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndc80Q9D0F1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndc80Q9D0F1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndc80Q9D0F1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ndc80Q9D0F1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ndc80Q9D0F1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndc80Q9D0F1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.29■■□□□ 1
Ndc80Q9D0F1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.29■■□□□ 1
Ndc80Q9D0F1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ndc80Q9D0F1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndc80Q9D0F1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ndc80Q9D0F1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.29■■□□□ 1
Ndc80Q9D0F1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ndc80Q9D0F1 Gm45444-201ENSMUST00000211394 898 ntBASIC21.29■■□□□ 1
Ndc80Q9D0F1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndc80Q9D0F1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndc80Q9D0F1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndc80Q9D0F1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.28■■□□□ 1
Ndc80Q9D0F1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndc80Q9D0F1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.28■■□□□ 1
Ndc80Q9D0F1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndc80Q9D0F1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ndc80Q9D0F1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ndc80Q9D0F1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ndc80Q9D0F1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndc80Q9D0F1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ndc80Q9D0F1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.27■■□□□ 1
Ndc80Q9D0F1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndc80Q9D0F1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ndc80Q9D0F1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc80Q9D0F1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc80Q9D0F1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.26■□□□□ 0.99
Ndc80Q9D0F1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc80Q9D0F1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc80Q9D0F1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc80Q9D0F1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ndc80Q9D0F1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc80Q9D0F1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc80Q9D0F1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ndc80Q9D0F1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc80Q9D0F1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ndc80Q9D0F1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc80Q9D0F1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndc80Q9D0F1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.24■□□□□ 0.99
Ndc80Q9D0F1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ndc80Q9D0F1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ndc80Q9D0F1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ndc80Q9D0F1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ndc80Q9D0F1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndc80Q9D0F1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndc80Q9D0F1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndc80Q9D0F1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ndc80Q9D0F1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Ndc80Q9D0F1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndc80Q9D0F1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ndc80Q9D0F1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndc80Q9D0F1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndc80Q9D0F1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ndc80Q9D0F1 Gm43566-201ENSMUST00000196851 808 ntBASIC21.2■□□□□ 0.98
Ndc80Q9D0F1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Ndc80Q9D0F1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms