Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CR55 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Q9CR55 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CR55 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.32■□□□□ 0.68
Q9CR55 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Q9CR55 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9CR55 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Q9CR55 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Q9CR55 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CR55 Gm7432-201ENSMUST00000210343 879 ntBASIC19.31■□□□□ 0.68
Q9CR55 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CR55 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CR55 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9CR55 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CR55 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CR55 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CR55 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CR55 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Q9CR55 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Q9CR55 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CR55 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CR55 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Q9CR55 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CR55 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CR55 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CR55 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CR55 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.29■□□□□ 0.68
Q9CR55 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CR55 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CR55 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.28■□□□□ 0.68
Q9CR55 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CR55 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CR55 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CR55 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CR55 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Q9CR55 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CR55 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CR55 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CR55 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q9CR55 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q9CR55 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q9CR55 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q9CR55 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.26■□□□□ 0.67
Q9CR55 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CR55 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Q9CR55 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Q9CR55 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CR55 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Q9CR55 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Q9CR55 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CR55 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CR55 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CR55 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.24■□□□□ 0.67
Q9CR55 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CR55 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.24■□□□□ 0.67
Q9CR55 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CR55 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CR55 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Q9CR55 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.24■□□□□ 0.67
Q9CR55 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q9CR55 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q9CR55 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9CR55 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Q9CR55 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q9CR55 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9CR55 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9CR55 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.23■□□□□ 0.67
Q9CR55 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9CR55 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q9CR55 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Q9CR55 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q9CR55 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Q9CR55 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Q9CR55 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q9CR55 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q9CR55 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q9CR55 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q9CR55 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9CR55 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9CR55 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9CR55 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9CR55 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9CR55 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9CR55 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Q9CR55 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Q9CR55 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q9CR55 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q9CR55 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Q9CR55 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Q9CR55 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q9CR55 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Q9CR55 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms