Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm7Q9CQQ8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Lsm7Q9CQQ8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm7Q9CQQ8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.3■■□□□ 1
Lsm7Q9CQQ8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm7Q9CQQ8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm7Q9CQQ8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lsm7Q9CQQ8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm7Q9CQQ8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm7Q9CQQ8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lsm7Q9CQQ8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lsm7Q9CQQ8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm7Q9CQQ8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm7Q9CQQ8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.27■■□□□ 1
Lsm7Q9CQQ8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm7Q9CQQ8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.25■□□□□ 0.99
Lsm7Q9CQQ8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.24■□□□□ 0.99
Lsm7Q9CQQ8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.24■□□□□ 0.99
Lsm7Q9CQQ8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Lsm7Q9CQQ8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm7Q9CQQ8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm7Q9CQQ8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm7Q9CQQ8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm7Q9CQQ8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.21■□□□□ 0.99
Lsm7Q9CQQ8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.21■□□□□ 0.99
Lsm7Q9CQQ8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm7Q9CQQ8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm7Q9CQQ8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lsm7Q9CQQ8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Lsm7Q9CQQ8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm7Q9CQQ8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm7Q9CQQ8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm7Q9CQQ8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm7Q9CQQ8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm7Q9CQQ8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Gm9847-201ENSMUST00000052528 599 ntBASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm7Q9CQQ8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms