Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb2Q91Y00 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Pcdhb2Q91Y00 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.35■■□□□ 1.17
Pcdhb2Q91Y00 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb2Q91Y00 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.35■■□□□ 1.17
Pcdhb2Q91Y00 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.35■■□□□ 1.17
Pcdhb2Q91Y00 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb2Q91Y00 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.35■■□□□ 1.17
Pcdhb2Q91Y00 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb2Q91Y00 Gm14117-201ENSMUST00000122417 843 ntBASIC22.34■■□□□ 1.17
Pcdhb2Q91Y00 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb2Q91Y00 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.34■■□□□ 1.17
Pcdhb2Q91Y00 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb2Q91Y00 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb2Q91Y00 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhb2Q91Y00 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Pcdhb2Q91Y00 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhb2Q91Y00 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb2Q91Y00 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Pcdhb2Q91Y00 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Pcdhb2Q91Y00 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.32■■□□□ 1.16
Pcdhb2Q91Y00 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.32■■□□□ 1.16
Pcdhb2Q91Y00 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb2Q91Y00 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb2Q91Y00 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb2Q91Y00 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb2Q91Y00 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Gm7417-201ENSMUST00000192950 473 ntBASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Gm40881-201ENSMUST00000223397 166 ntBASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb2Q91Y00 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb2Q91Y00 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhb2Q91Y00 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb2Q91Y00 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhb2Q91Y00 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhb2Q91Y00 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhb2Q91Y00 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb2Q91Y00 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb2Q91Y00 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb2Q91Y00 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb2Q91Y00 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb2Q91Y00 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.28■■□□□ 1.16
Pcdhb2Q91Y00 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb2Q91Y00 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb2Q91Y00 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.28■■□□□ 1.16
Pcdhb2Q91Y00 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhb2Q91Y00 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb2Q91Y00 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb2Q91Y00 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Pcdhb2Q91Y00 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb2Q91Y00 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb2Q91Y00 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.26■■□□□ 1.15
Pcdhb2Q91Y00 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb2Q91Y00 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb2Q91Y00 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb2Q91Y00 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb2Q91Y00 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb2Q91Y00 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb2Q91Y00 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhb2Q91Y00 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb2Q91Y00 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhb2Q91Y00 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.23■■□□□ 1.15
Pcdhb2Q91Y00 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb2Q91Y00 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.23■■□□□ 1.15
Pcdhb2Q91Y00 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhb2Q91Y00 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb2Q91Y00 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb2Q91Y00 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb2Q91Y00 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhb2Q91Y00 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms