Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpp40Q8R1F9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Gm7417-201ENSMUST00000192950 473 ntBASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rpp40Q8R1F9 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.66■■□□□ 1.22
Rpp40Q8R1F9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Rpp40Q8R1F9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpp40Q8R1F9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rpp40Q8R1F9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp40Q8R1F9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpp40Q8R1F9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Rpp40Q8R1F9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpp40Q8R1F9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpp40Q8R1F9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpp40Q8R1F9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpp40Q8R1F9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Rpp40Q8R1F9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp40Q8R1F9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp40Q8R1F9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp40Q8R1F9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rpp40Q8R1F9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rpp40Q8R1F9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp40Q8R1F9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp40Q8R1F9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp40Q8R1F9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp40Q8R1F9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp40Q8R1F9 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.6■■□□□ 1.21
Rpp40Q8R1F9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rpp40Q8R1F9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.6■■□□□ 1.21
Rpp40Q8R1F9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.6■■□□□ 1.21
Rpp40Q8R1F9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rpp40Q8R1F9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rpp40Q8R1F9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp40Q8R1F9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rpp40Q8R1F9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rpp40Q8R1F9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Rpp40Q8R1F9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.58■■□□□ 1.21
Rpp40Q8R1F9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.58■■□□□ 1.21
Rpp40Q8R1F9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rpp40Q8R1F9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rpp40Q8R1F9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rpp40Q8R1F9 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.58■■□□□ 1.2
Rpp40Q8R1F9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpp40Q8R1F9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rpp40Q8R1F9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.56■■□□□ 1.2
Rpp40Q8R1F9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp40Q8R1F9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.55■■□□□ 1.2
Rpp40Q8R1F9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp40Q8R1F9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp40Q8R1F9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp40Q8R1F9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp40Q8R1F9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp40Q8R1F9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms