Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28bQ8CEG5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc28bQ8CEG5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc28bQ8CEG5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc28bQ8CEG5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc28bQ8CEG5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc28bQ8CEG5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc28bQ8CEG5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Gm11599-201ENSMUST00000118720 878 ntBASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc28bQ8CEG5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc28bQ8CEG5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Ccdc28bQ8CEG5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc28bQ8CEG5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc28bQ8CEG5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.69■□□□□ 0.9
Ccdc28bQ8CEG5 Gm44428-201ENSMUST00000204474 874 ntBASIC20.69■□□□□ 0.9
Ccdc28bQ8CEG5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc28bQ8CEG5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc28bQ8CEG5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc28bQ8CEG5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc28bQ8CEG5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc28bQ8CEG5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc28bQ8CEG5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc28bQ8CEG5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc28bQ8CEG5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc28bQ8CEG5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc28bQ8CEG5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc28bQ8CEG5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc28bQ8CEG5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc28bQ8CEG5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.67■□□□□ 0.9
Ccdc28bQ8CEG5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc28bQ8CEG5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.67■□□□□ 0.9
Ccdc28bQ8CEG5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc28bQ8CEG5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc28bQ8CEG5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc28bQ8CEG5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc28bQ8CEG5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc28bQ8CEG5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.64■□□□□ 0.89
Ccdc28bQ8CEG5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.64■□□□□ 0.89
Ccdc28bQ8CEG5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc28bQ8CEG5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc28bQ8CEG5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc28bQ8CEG5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc28bQ8CEG5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc28bQ8CEG5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Ccdc28bQ8CEG5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc28bQ8CEG5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc28bQ8CEG5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.63■□□□□ 0.89
Ccdc28bQ8CEG5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc28bQ8CEG5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc28bQ8CEG5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.62■□□□□ 0.89
Ccdc28bQ8CEG5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc28bQ8CEG5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc28bQ8CEG5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ccdc28bQ8CEG5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms