Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Brat1Q8C3R1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.25■■□□□ 1.15
Brat1Q8C3R1 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.25■■□□□ 1.15
Brat1Q8C3R1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Brat1Q8C3R1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Brat1Q8C3R1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Brat1Q8C3R1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.24■■□□□ 1.15
Brat1Q8C3R1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.24■■□□□ 1.15
Brat1Q8C3R1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.24■■□□□ 1.15
Brat1Q8C3R1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Brat1Q8C3R1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
Brat1Q8C3R1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Brat1Q8C3R1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.23■■□□□ 1.15
Brat1Q8C3R1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Brat1Q8C3R1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Brat1Q8C3R1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Brat1Q8C3R1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Gm7417-201ENSMUST00000192950 473 ntBASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Brat1Q8C3R1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Brat1Q8C3R1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Brat1Q8C3R1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Brat1Q8C3R1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Brat1Q8C3R1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Brat1Q8C3R1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Brat1Q8C3R1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Brat1Q8C3R1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Brat1Q8C3R1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Brat1Q8C3R1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.18■■□□□ 1.14
Brat1Q8C3R1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Brat1Q8C3R1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.18■■□□□ 1.14
Brat1Q8C3R1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Brat1Q8C3R1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Brat1Q8C3R1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Brat1Q8C3R1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.17■■□□□ 1.14
Brat1Q8C3R1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.17■■□□□ 1.14
Brat1Q8C3R1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Brat1Q8C3R1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Brat1Q8C3R1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Brat1Q8C3R1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brat1Q8C3R1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brat1Q8C3R1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.16■■□□□ 1.14
Brat1Q8C3R1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Brat1Q8C3R1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.16■■□□□ 1.14
Brat1Q8C3R1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brat1Q8C3R1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brat1Q8C3R1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brat1Q8C3R1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brat1Q8C3R1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brat1Q8C3R1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brat1Q8C3R1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Brat1Q8C3R1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brat1Q8C3R1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Brat1Q8C3R1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.15■■□□□ 1.14
Brat1Q8C3R1 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.15■■□□□ 1.14
Brat1Q8C3R1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Brat1Q8C3R1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Brat1Q8C3R1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Brat1Q8C3R1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Brat1Q8C3R1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Brat1Q8C3R1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Brat1Q8C3R1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brat1Q8C3R1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brat1Q8C3R1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brat1Q8C3R1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Brat1Q8C3R1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.13■■□□□ 1.13
Brat1Q8C3R1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brat1Q8C3R1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Brat1Q8C3R1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Brat1Q8C3R1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.12■■□□□ 1.13
Brat1Q8C3R1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Brat1Q8C3R1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Brat1Q8C3R1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.12■■□□□ 1.13
Brat1Q8C3R1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.12■■□□□ 1.13
Brat1Q8C3R1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Brat1Q8C3R1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Brat1Q8C3R1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Brat1Q8C3R1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Brat1Q8C3R1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms