Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 Gm45444-201ENSMUST00000211394 898 ntBASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf4Q8BQZ5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf4Q8BQZ5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf4Q8BQZ5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf4Q8BQZ5 Gm5812-201ENSMUST00000061073 957 ntBASIC20.32■□□□□ 0.84
Cpsf4Q8BQZ5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf4Q8BQZ5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf4Q8BQZ5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Cpsf4Q8BQZ5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Gm43566-201ENSMUST00000196851 808 ntBASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.31■□□□□ 0.84
Cpsf4Q8BQZ5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4Q8BQZ5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4Q8BQZ5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4Q8BQZ5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.3■□□□□ 0.84
Cpsf4Q8BQZ5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4Q8BQZ5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf4Q8BQZ5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4Q8BQZ5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4Q8BQZ5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4Q8BQZ5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4Q8BQZ5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cpsf4Q8BQZ5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4Q8BQZ5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf4Q8BQZ5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf4Q8BQZ5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf4Q8BQZ5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf4Q8BQZ5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf4Q8BQZ5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf4Q8BQZ5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cpsf4Q8BQZ5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.26■□□□□ 0.83
Cpsf4Q8BQZ5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.26■□□□□ 0.83
Cpsf4Q8BQZ5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf4Q8BQZ5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpsf4Q8BQZ5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
Cpsf4Q8BQZ5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf4Q8BQZ5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4Q8BQZ5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4Q8BQZ5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
Cpsf4Q8BQZ5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4Q8BQZ5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Cpsf4Q8BQZ5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf4Q8BQZ5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.23■□□□□ 0.83
Cpsf4Q8BQZ5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf4Q8BQZ5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cpsf4Q8BQZ5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Cpsf4Q8BQZ5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.2■□□□□ 0.83
Cpsf4Q8BQZ5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Cpsf4Q8BQZ5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf4Q8BQZ5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cpsf4Q8BQZ5 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.2■□□□□ 0.82
Cpsf4Q8BQZ5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf4Q8BQZ5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms