Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.48■■□□□ 1.19
Nucks1Q80XU3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nucks1Q80XU3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nucks1Q80XU3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Nucks1Q80XU3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nucks1Q80XU3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nucks1Q80XU3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nucks1Q80XU3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.46■■□□□ 1.19
Nucks1Q80XU3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nucks1Q80XU3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nucks1Q80XU3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nucks1Q80XU3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Nucks1Q80XU3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nucks1Q80XU3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nucks1Q80XU3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nucks1Q80XU3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nucks1Q80XU3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nucks1Q80XU3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nucks1Q80XU3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.44■■□□□ 1.18
Nucks1Q80XU3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Nucks1Q80XU3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nucks1Q80XU3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Nucks1Q80XU3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nucks1Q80XU3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nucks1Q80XU3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.43■■□□□ 1.18
Nucks1Q80XU3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Nucks1Q80XU3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.42■■□□□ 1.18
Nucks1Q80XU3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.42■■□□□ 1.18
Nucks1Q80XU3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.41■■□□□ 1.18
Nucks1Q80XU3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.4■■□□□ 1.18
Nucks1Q80XU3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nucks1Q80XU3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Nucks1Q80XU3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Nucks1Q80XU3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.4■■□□□ 1.18
Nucks1Q80XU3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Nucks1Q80XU3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.39■■□□□ 1.18
Nucks1Q80XU3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Nucks1Q80XU3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Nucks1Q80XU3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nucks1Q80XU3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Nucks1Q80XU3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.39■■□□□ 1.17
Nucks1Q80XU3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nucks1Q80XU3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Nucks1Q80XU3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nucks1Q80XU3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.37■■□□□ 1.17
Nucks1Q80XU3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.36■■□□□ 1.17
Nucks1Q80XU3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nucks1Q80XU3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nucks1Q80XU3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Nucks1Q80XU3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nucks1Q80XU3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Nucks1Q80XU3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms