Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.95■□□□□ 0.94
Ssx9Q6XAS3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssx9Q6XAS3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssx9Q6XAS3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Ssx9Q6XAS3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ssx9Q6XAS3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssx9Q6XAS3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssx9Q6XAS3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssx9Q6XAS3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssx9Q6XAS3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssx9Q6XAS3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ssx9Q6XAS3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssx9Q6XAS3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ssx9Q6XAS3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.93■□□□□ 0.94
Ssx9Q6XAS3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssx9Q6XAS3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ssx9Q6XAS3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssx9Q6XAS3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ssx9Q6XAS3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssx9Q6XAS3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ssx9Q6XAS3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
Ssx9Q6XAS3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssx9Q6XAS3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssx9Q6XAS3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssx9Q6XAS3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssx9Q6XAS3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ssx9Q6XAS3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssx9Q6XAS3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ssx9Q6XAS3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ssx9Q6XAS3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssx9Q6XAS3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssx9Q6XAS3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ssx9Q6XAS3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.87■□□□□ 0.93
Ssx9Q6XAS3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.87■□□□□ 0.93
Ssx9Q6XAS3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ssx9Q6XAS3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ssx9Q6XAS3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ssx9Q6XAS3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ssx9Q6XAS3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssx9Q6XAS3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssx9Q6XAS3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssx9Q6XAS3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Ssx9Q6XAS3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssx9Q6XAS3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssx9Q6XAS3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ssx9Q6XAS3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ssx9Q6XAS3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssx9Q6XAS3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssx9Q6XAS3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.84■□□□□ 0.93
Ssx9Q6XAS3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssx9Q6XAS3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ssx9Q6XAS3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ssx9Q6XAS3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssx9Q6XAS3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssx9Q6XAS3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.83■□□□□ 0.93
Ssx9Q6XAS3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.83■□□□□ 0.93
Ssx9Q6XAS3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssx9Q6XAS3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssx9Q6XAS3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssx9Q6XAS3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssx9Q6XAS3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ssx9Q6XAS3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms