Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.9■□□□□ 0.46
Clns1aQ61189 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clns1aQ61189 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Clns1aQ61189 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Clns1aQ61189 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clns1aQ61189 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clns1aQ61189 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clns1aQ61189 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clns1aQ61189 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clns1aQ61189 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clns1aQ61189 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Clns1aQ61189 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clns1aQ61189 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clns1aQ61189 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clns1aQ61189 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Clns1aQ61189 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clns1aQ61189 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Clns1aQ61189 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clns1aQ61189 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Clns1aQ61189 Gm6821-201ENSMUST00000107540 542 ntBASIC17.88■□□□□ 0.45
Clns1aQ61189 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.88■□□□□ 0.45
Clns1aQ61189 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clns1aQ61189 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clns1aQ61189 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clns1aQ61189 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.87■□□□□ 0.45
Clns1aQ61189 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Clns1aQ61189 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Clns1aQ61189 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.87■□□□□ 0.45
Clns1aQ61189 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clns1aQ61189 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clns1aQ61189 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clns1aQ61189 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clns1aQ61189 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Clns1aQ61189 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clns1aQ61189 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clns1aQ61189 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.85■□□□□ 0.45
Clns1aQ61189 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clns1aQ61189 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clns1aQ61189 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clns1aQ61189 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clns1aQ61189 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clns1aQ61189 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Clns1aQ61189 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clns1aQ61189 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clns1aQ61189 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.84■□□□□ 0.45
Clns1aQ61189 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clns1aQ61189 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Clns1aQ61189 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Clns1aQ61189 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.84■□□□□ 0.45
Clns1aQ61189 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clns1aQ61189 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clns1aQ61189 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clns1aQ61189 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clns1aQ61189 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clns1aQ61189 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clns1aQ61189 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clns1aQ61189 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clns1aQ61189 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clns1aQ61189 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.82■□□□□ 0.44
Clns1aQ61189 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clns1aQ61189 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clns1aQ61189 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Clns1aQ61189 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clns1aQ61189 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clns1aQ61189 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clns1aQ61189 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clns1aQ61189 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clns1aQ61189 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clns1aQ61189 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clns1aQ61189 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clns1aQ61189 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.8■□□□□ 0.44
Clns1aQ61189 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Clns1aQ61189 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clns1aQ61189 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clns1aQ61189 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Clns1aQ61189 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clns1aQ61189 Gm45364-201ENSMUST00000210883 159 ntBASIC17.8■□□□□ 0.44
Clns1aQ61189 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clns1aQ61189 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clns1aQ61189 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Clns1aQ61189 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clns1aQ61189 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clns1aQ61189 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clns1aQ61189 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms