Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Gm9959-201ENSMUST00000068277 390 ntBASIC19.85■□□□□ 0.77
Mmp25Q3U435 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp25Q3U435 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp25Q3U435 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp25Q3U435 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp25Q3U435 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Mmp25Q3U435 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.83■□□□□ 0.77
Mmp25Q3U435 Gm45102-201ENSMUST00000207427 857 ntBASIC19.83■□□□□ 0.77
Mmp25Q3U435 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp25Q3U435 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.83■□□□□ 0.77
Mmp25Q3U435 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp25Q3U435 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp25Q3U435 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp25Q3U435 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
Mmp25Q3U435 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.83■□□□□ 0.76
Mmp25Q3U435 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp25Q3U435 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Mmp25Q3U435 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp25Q3U435 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Mmp25Q3U435 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.82■□□□□ 0.76
Mmp25Q3U435 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Mmp25Q3U435 Etf1-202ENSMUST00000180351 108 ntBASIC19.82■□□□□ 0.76
Mmp25Q3U435 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Mmp25Q3U435 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp25Q3U435 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp25Q3U435 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.81■□□□□ 0.76
Mmp25Q3U435 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp25Q3U435 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Mmp25Q3U435 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Mmp25Q3U435 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.8■□□□□ 0.76
Mmp25Q3U435 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp25Q3U435 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp25Q3U435 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp25Q3U435 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp25Q3U435 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp25Q3U435 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Mmp25Q3U435 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp25Q3U435 Gm7417-201ENSMUST00000192950 473 ntBASIC19.79■□□□□ 0.76
Mmp25Q3U435 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.79■□□□□ 0.76
Mmp25Q3U435 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.79■□□□□ 0.76
Mmp25Q3U435 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp25Q3U435 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp25Q3U435 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp25Q3U435 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Mmp25Q3U435 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp25Q3U435 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp25Q3U435 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp25Q3U435 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp25Q3U435 Gm14117-201ENSMUST00000122417 843 ntBASIC19.77■□□□□ 0.76
Mmp25Q3U435 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.77■□□□□ 0.76
Mmp25Q3U435 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp25Q3U435 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp25Q3U435 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Mmp25Q3U435 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mmp25Q3U435 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Mmp25Q3U435 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.76■□□□□ 0.75
Mmp25Q3U435 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.76■□□□□ 0.75
Mmp25Q3U435 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Mmp25Q3U435 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.75■□□□□ 0.75
Mmp25Q3U435 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.75■□□□□ 0.75
Mmp25Q3U435 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp25Q3U435 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mmp25Q3U435 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp25Q3U435 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms