Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf1P81269 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf1P81269 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf1P81269 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf1P81269 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf1P81269 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.19■□□□□ 0.5
Atf1P81269 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atf1P81269 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf1P81269 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Atf1P81269 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf1P81269 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atf1P81269 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf1P81269 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.18■□□□□ 0.5
Atf1P81269 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atf1P81269 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Atf1P81269 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf1P81269 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf1P81269 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf1P81269 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atf1P81269 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf1P81269 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atf1P81269 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf1P81269 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.17■□□□□ 0.5
Atf1P81269 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.17■□□□□ 0.5
Atf1P81269 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.17■□□□□ 0.5
Atf1P81269 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Atf1P81269 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.16■□□□□ 0.5
Atf1P81269 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf1P81269 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atf1P81269 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atf1P81269 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Atf1P81269 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf1P81269 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf1P81269 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Atf1P81269 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.15■□□□□ 0.5
Atf1P81269 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf1P81269 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf1P81269 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf1P81269 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf1P81269 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atf1P81269 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atf1P81269 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Atf1P81269 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Atf1P81269 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Atf1P81269 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atf1P81269 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atf1P81269 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atf1P81269 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atf1P81269 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Atf1P81269 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf1P81269 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Atf1P81269 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.13■□□□□ 0.49
Atf1P81269 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Atf1P81269 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Atf1P81269 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atf1P81269 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.13■□□□□ 0.49
Atf1P81269 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf1P81269 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Atf1P81269 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.12■□□□□ 0.49
Atf1P81269 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Atf1P81269 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf1P81269 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Atf1P81269 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.11■□□□□ 0.49
Atf1P81269 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Atf1P81269 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.11■□□□□ 0.49
Atf1P81269 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf1P81269 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf1P81269 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf1P81269 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf1P81269 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Atf1P81269 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf1P81269 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf1P81269 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atf1P81269 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf1P81269 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf1P81269 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atf1P81269 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.1■□□□□ 0.49
Atf1P81269 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf1P81269 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf1P81269 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf1P81269 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf1P81269 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms