Protein–RNA interactions for Protein: P35980

Rpl18, 60S ribosomal protein L18, mousemouse

Known RBP Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl18P35980 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rpl18P35980 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl18P35980 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rpl18P35980 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.91■□□□□ 0.62
Rpl18P35980 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl18P35980 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rpl18P35980 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rpl18P35980 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl18P35980 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.91■□□□□ 0.62
Rpl18P35980 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rpl18P35980 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl18P35980 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rpl18P35980 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl18P35980 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl18P35980 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl18P35980 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl18P35980 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rpl18P35980 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rpl18P35980 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl18P35980 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl18P35980 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl18P35980 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpl18P35980 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rpl18P35980 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpl18P35980 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.89■□□□□ 0.61
Rpl18P35980 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rpl18P35980 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpl18P35980 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.88■□□□□ 0.61
Rpl18P35980 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.88■□□□□ 0.61
Rpl18P35980 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.88■□□□□ 0.61
Rpl18P35980 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rpl18P35980 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.88■□□□□ 0.61
Rpl18P35980 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.88■□□□□ 0.61
Rpl18P35980 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl18P35980 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl18P35980 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl18P35980 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl18P35980 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl18P35980 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rpl18P35980 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl18P35980 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl18P35980 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl18P35980 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl18P35980 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Rpl18P35980 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl18P35980 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl18P35980 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl18P35980 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.85■□□□□ 0.61
Rpl18P35980 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rpl18P35980 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl18P35980 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.85■□□□□ 0.61
Rpl18P35980 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl18P35980 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl18P35980 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl18P35980 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rpl18P35980 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rpl18P35980 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl18P35980 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.84■□□□□ 0.61
Rpl18P35980 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl18P35980 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl18P35980 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl18P35980 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl18P35980 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl18P35980 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rpl18P35980 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl18P35980 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rpl18P35980 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rpl18P35980 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
Rpl18P35980 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpl18P35980 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rpl18P35980 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.83■□□□□ 0.61
Rpl18P35980 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Rpl18P35980 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.83■□□□□ 0.6
Rpl18P35980 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rpl18P35980 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.83■□□□□ 0.6
Rpl18P35980 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl18P35980 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms