Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NclP09405 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC31.28■■■□□ 2.6
NclP09405 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC31.28■■■□□ 2.6
NclP09405 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NclP09405 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NclP09405 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NclP09405 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NclP09405 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NclP09405 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
NclP09405 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NclP09405 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
NclP09405 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.6
NclP09405 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
NclP09405 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC31.26■■■□□ 2.59
NclP09405 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NclP09405 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC31.26■■■□□ 2.59
NclP09405 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
NclP09405 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
NclP09405 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
NclP09405 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NclP09405 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
NclP09405 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NclP09405 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
NclP09405 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC31.24■■■□□ 2.59
NclP09405 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC31.24■■■□□ 2.59
NclP09405 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NclP09405 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
NclP09405 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC31.24■■■□□ 2.59
NclP09405 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
NclP09405 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
NclP09405 Gm21956-201ENSMUST00000179946 522 ntBASIC31.22■■■□□ 2.59
NclP09405 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
NclP09405 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC31.22■■■□□ 2.59
NclP09405 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NclP09405 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
NclP09405 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NclP09405 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC31.22■■■□□ 2.59
NclP09405 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC31.21■■■□□ 2.59
NclP09405 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NclP09405 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NclP09405 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
NclP09405 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NclP09405 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
NclP09405 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC31.2■■■□□ 2.59
NclP09405 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
NclP09405 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NclP09405 AC115037.1-201ENSMUST00000223391 2173 ntBASIC31.2■■■□□ 2.58
NclP09405 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NclP09405 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
NclP09405 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NclP09405 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NclP09405 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
NclP09405 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
NclP09405 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC31.17■■■□□ 2.58
NclP09405 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
NclP09405 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NclP09405 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NclP09405 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
NclP09405 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
NclP09405 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
NclP09405 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC31.15■■■□□ 2.58
NclP09405 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NclP09405 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
NclP09405 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
NclP09405 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NclP09405 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC31.14■■■□□ 2.58
NclP09405 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.14■■■□□ 2.58
NclP09405 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC31.14■■■□□ 2.58
NclP09405 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NclP09405 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
NclP09405 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC31.13■■■□□ 2.57
NclP09405 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NclP09405 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NclP09405 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
NclP09405 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NclP09405 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
NclP09405 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NclP09405 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC31.11■■■□□ 2.57
NclP09405 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC31.11■■■□□ 2.57
NclP09405 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC31.11■■■□□ 2.57
NclP09405 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
NclP09405 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NclP09405 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
NclP09405 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NclP09405 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC31.1■■■□□ 2.57
NclP09405 Golgb1-201ENSMUST00000023534 498 ntBASIC31.1■■■□□ 2.57
NclP09405 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NclP09405 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
NclP09405 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NclP09405 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NclP09405 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.09■■■□□ 2.57
NclP09405 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms