Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh16O88338 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh16O88338 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh16O88338 Terc-201ENSMUST00000082862 423 ntBASIC20.52■□□□□ 0.88
Cdh16O88338 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh16O88338 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdh16O88338 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cdh16O88338 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.51■□□□□ 0.87
Cdh16O88338 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cdh16O88338 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Cdh16O88338 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh16O88338 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh16O88338 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh16O88338 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh16O88338 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh16O88338 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh16O88338 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh16O88338 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.5■□□□□ 0.87
Cdh16O88338 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh16O88338 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh16O88338 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Cdh16O88338 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh16O88338 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh16O88338 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh16O88338 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh16O88338 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh16O88338 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh16O88338 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cdh16O88338 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh16O88338 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh16O88338 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh16O88338 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh16O88338 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.48■□□□□ 0.87
Cdh16O88338 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh16O88338 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh16O88338 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh16O88338 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh16O88338 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh16O88338 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cdh16O88338 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.47■□□□□ 0.87
Cdh16O88338 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh16O88338 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh16O88338 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Cdh16O88338 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh16O88338 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh16O88338 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh16O88338 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh16O88338 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh16O88338 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh16O88338 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh16O88338 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.45■□□□□ 0.86
Cdh16O88338 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.45■□□□□ 0.86
Cdh16O88338 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.45■□□□□ 0.86
Cdh16O88338 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh16O88338 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cdh16O88338 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh16O88338 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.44■□□□□ 0.86
Cdh16O88338 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh16O88338 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.44■□□□□ 0.86
Cdh16O88338 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.44■□□□□ 0.86
Cdh16O88338 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cdh16O88338 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh16O88338 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Cdh16O88338 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh16O88338 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh16O88338 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh16O88338 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh16O88338 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh16O88338 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh16O88338 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.43■□□□□ 0.86
Cdh16O88338 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh16O88338 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh16O88338 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh16O88338 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh16O88338 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh16O88338 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh16O88338 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh16O88338 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh16O88338 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh16O88338 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cdh16O88338 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cdh16O88338 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh16O88338 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Cdh16O88338 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.41■□□□□ 0.86
Cdh16O88338 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.41■□□□□ 0.86
Cdh16O88338 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cdh16O88338 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cdh16O88338 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh16O88338 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh16O88338 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh16O88338 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh16O88338 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh16O88338 Gm6311-201ENSMUST00000073790 878 ntBASIC20.4■□□□□ 0.86
Cdh16O88338 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Cdh16O88338 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.39■□□□□ 0.86
Cdh16O88338 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdh16O88338 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh16O88338 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh16O88338 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh16O88338 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms