Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6bO35451 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Atf6bO35451 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Atf6bO35451 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.13■□□□□ 0.49
Atf6bO35451 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Atf6bO35451 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.13■□□□□ 0.49
Atf6bO35451 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6bO35451 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.13■□□□□ 0.49
Atf6bO35451 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Atf6bO35451 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6bO35451 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf6bO35451 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.11■□□□□ 0.49
Atf6bO35451 Gm15546-201ENSMUST00000122095 826 ntBASIC18.11■□□□□ 0.49
Atf6bO35451 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.11■□□□□ 0.49
Atf6bO35451 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf6bO35451 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.11■□□□□ 0.49
Atf6bO35451 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf6bO35451 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.11■□□□□ 0.49
Atf6bO35451 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf6bO35451 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf6bO35451 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf6bO35451 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atf6bO35451 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atf6bO35451 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atf6bO35451 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.1■□□□□ 0.49
Atf6bO35451 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.1■□□□□ 0.49
Atf6bO35451 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atf6bO35451 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf6bO35451 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atf6bO35451 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf6bO35451 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Atf6bO35451 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf6bO35451 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atf6bO35451 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Atf6bO35451 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Atf6bO35451 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf6bO35451 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf6bO35451 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf6bO35451 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Atf6bO35451 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atf6bO35451 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Atf6bO35451 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Atf6bO35451 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf6bO35451 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.08■□□□□ 0.48
Atf6bO35451 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Atf6bO35451 Gm15820-201ENSMUST00000201566 728 ntBASIC18.08■□□□□ 0.48
Atf6bO35451 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Atf6bO35451 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Atf6bO35451 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Atf6bO35451 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Atf6bO35451 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atf6bO35451 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf6bO35451 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Atf6bO35451 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atf6bO35451 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atf6bO35451 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.07■□□□□ 0.48
Atf6bO35451 Gm10232-201ENSMUST00000089221 720 ntBASIC18.07■□□□□ 0.48
Atf6bO35451 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf6bO35451 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf6bO35451 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.06■□□□□ 0.48
Atf6bO35451 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.06■□□□□ 0.48
Atf6bO35451 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf6bO35451 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.06■□□□□ 0.48
Atf6bO35451 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.05■□□□□ 0.48
Atf6bO35451 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6bO35451 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6bO35451 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.05■□□□□ 0.48
Atf6bO35451 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Atf6bO35451 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Atf6bO35451 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6bO35451 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Atf6bO35451 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf6bO35451 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms