Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3727J3QM54 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3727J3QM54 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.83■□□□□ 0.44
Gm3727J3QM54 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.83■□□□□ 0.44
Gm3727J3QM54 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm3727J3QM54 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3727J3QM54 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3727J3QM54 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm3727J3QM54 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm3727J3QM54 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3727J3QM54 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3727J3QM54 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3727J3QM54 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3727J3QM54 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm3727J3QM54 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3727J3QM54 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm3727J3QM54 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.79■□□□□ 0.44
Gm3727J3QM54 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3727J3QM54 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.79■□□□□ 0.44
Gm3727J3QM54 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.79■□□□□ 0.44
Gm3727J3QM54 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3727J3QM54 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3727J3QM54 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3727J3QM54 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3727J3QM54 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm3727J3QM54 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.78■□□□□ 0.44
Gm3727J3QM54 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.78■□□□□ 0.44
Gm3727J3QM54 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm3727J3QM54 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3727J3QM54 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3727J3QM54 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3727J3QM54 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3727J3QM54 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Gm3727J3QM54 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3727J3QM54 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3727J3QM54 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Gm3727J3QM54 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3727J3QM54 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3727J3QM54 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3727J3QM54 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3727J3QM54 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3727J3QM54 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3727J3QM54 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3727J3QM54 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Gm3727J3QM54 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3727J3QM54 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3727J3QM54 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.75■□□□□ 0.43
Gm3727J3QM54 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3727J3QM54 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3727J3QM54 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gm3727J3QM54 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3727J3QM54 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm3727J3QM54 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3727J3QM54 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3727J3QM54 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3727J3QM54 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3727J3QM54 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.74■□□□□ 0.43
Gm3727J3QM54 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm3727J3QM54 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3727J3QM54 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm3727J3QM54 Golph3-202ENSMUST00000226517 2359 ntBASIC17.73■□□□□ 0.43
Gm3727J3QM54 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3727J3QM54 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3727J3QM54 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3727J3QM54 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gm3727J3QM54 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3727J3QM54 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3727J3QM54 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3727J3QM54 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3727J3QM54 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm3727J3QM54 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3727J3QM54 Gm9812-201ENSMUST00000061934 968 ntBASIC17.72■□□□□ 0.43
Gm3727J3QM54 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms