Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Herc1E9PZP8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Herc1E9PZP8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Herc1E9PZP8 Gm8520-201ENSMUST00000186517 868 ntBASIC12.37□□□□□ -0.43
Herc1E9PZP8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Herc1E9PZP8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Herc1E9PZP8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Herc1E9PZP8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Herc1E9PZP8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Herc1E9PZP8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Herc1E9PZP8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Herc1E9PZP8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc1E9PZP8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Herc1E9PZP8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc1E9PZP8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Gm10819-201ENSMUST00000099988 561 ntBASIC12.35□□□□□ -0.43
Herc1E9PZP8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc1E9PZP8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Herc1E9PZP8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc1E9PZP8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc1E9PZP8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Herc1E9PZP8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc1E9PZP8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc1E9PZP8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc1E9PZP8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc1E9PZP8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Herc1E9PZP8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.32□□□□□ -0.44
Herc1E9PZP8 Gm25925-201ENSMUST00000158314 306 ntBASIC12.32□□□□□ -0.44
Herc1E9PZP8 Gm12441-201ENSMUST00000121806 588 ntBASIC12.32□□□□□ -0.44
Herc1E9PZP8 Gm40848-201ENSMUST00000221998 324 ntBASIC12.32□□□□□ -0.44
Herc1E9PZP8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Herc1E9PZP8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Herc1E9PZP8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Herc1E9PZP8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.29□□□□□ -0.44
Herc1E9PZP8 Gm11847-201ENSMUST00000125165 1119 ntBASIC12.29□□□□□ -0.44
Herc1E9PZP8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Herc1E9PZP8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Herc1E9PZP8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Herc1E9PZP8 Gm4968-201ENSMUST00000071458 858 ntBASIC12.29□□□□□ -0.44
Herc1E9PZP8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Herc1E9PZP8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.29□□□□□ -0.44
Herc1E9PZP8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Herc1E9PZP8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Gm13168-201ENSMUST00000121771 632 ntBASIC12.28□□□□□ -0.44
Herc1E9PZP8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Herc1E9PZP8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Herc1E9PZP8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.27□□□□□ -0.44
Herc1E9PZP8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Herc1E9PZP8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Herc1E9PZP8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.27□□□□□ -0.45
Herc1E9PZP8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Herc1E9PZP8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Herc1E9PZP8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms