Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh2d4bA6X942 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Sh2d4bA6X942 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh2d4bA6X942 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sh2d4bA6X942 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sh2d4bA6X942 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
Sh2d4bA6X942 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Sh2d4bA6X942 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sh2d4bA6X942 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Sh2d4bA6X942 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh2d4bA6X942 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Sh2d4bA6X942 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.39■■□□□ 1.17
Sh2d4bA6X942 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.39■■□□□ 1.17
Sh2d4bA6X942 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Sh2d4bA6X942 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh2d4bA6X942 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Sh2d4bA6X942 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sh2d4bA6X942 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Sh2d4bA6X942 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh2d4bA6X942 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh2d4bA6X942 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh2d4bA6X942 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh2d4bA6X942 Gm45417-201ENSMUST00000209533 758 ntBASIC22.36■■□□□ 1.17
Sh2d4bA6X942 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Sh2d4bA6X942 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh2d4bA6X942 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh2d4bA6X942 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh2d4bA6X942 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Sh2d4bA6X942 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh2d4bA6X942 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Sh2d4bA6X942 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh2d4bA6X942 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.34■■□□□ 1.17
Sh2d4bA6X942 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh2d4bA6X942 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh2d4bA6X942 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.33■■□□□ 1.17
Sh2d4bA6X942 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh2d4bA6X942 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh2d4bA6X942 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh2d4bA6X942 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sh2d4bA6X942 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh2d4bA6X942 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Sh2d4bA6X942 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.32■■□□□ 1.16
Sh2d4bA6X942 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh2d4bA6X942 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh2d4bA6X942 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.3■■□□□ 1.16
Sh2d4bA6X942 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.3■■□□□ 1.16
Sh2d4bA6X942 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
Sh2d4bA6X942 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh2d4bA6X942 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.3■■□□□ 1.16
Sh2d4bA6X942 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh2d4bA6X942 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh2d4bA6X942 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh2d4bA6X942 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms