Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lnp1A0A1B0GSK3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lnp1A0A1B0GSK3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lnp1A0A1B0GSK3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lnp1A0A1B0GSK3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lnp1A0A1B0GSK3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.48■□□□□ 0.39
Lnp1A0A1B0GSK3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.48■□□□□ 0.39
Lnp1A0A1B0GSK3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.48■□□□□ 0.39
Lnp1A0A1B0GSK3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lnp1A0A1B0GSK3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm13238-201ENSMUST00000117655 780 ntBASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lnp1A0A1B0GSK3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.46■□□□□ 0.39
Lnp1A0A1B0GSK3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Lnp1A0A1B0GSK3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.46■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lnp1A0A1B0GSK3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Lnp1A0A1B0GSK3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lnp1A0A1B0GSK3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.46■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lnp1A0A1B0GSK3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Gm45444-201ENSMUST00000211394 898 ntBASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Gm5921-201ENSMUST00000075898 882 ntBASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.44■□□□□ 0.38
Lnp1A0A1B0GSK3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lnp1A0A1B0GSK3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lnp1A0A1B0GSK3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lnp1A0A1B0GSK3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lnp1A0A1B0GSK3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lnp1A0A1B0GSK3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lnp1A0A1B0GSK3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lnp1A0A1B0GSK3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lnp1A0A1B0GSK3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lnp1A0A1B0GSK3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lnp1A0A1B0GSK3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lnp1A0A1B0GSK3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lnp1A0A1B0GSK3 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lnp1A0A1B0GSK3 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.39■□□□□ 0.38
Lnp1A0A1B0GSK3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lnp1A0A1B0GSK3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lnp1A0A1B0GSK3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lnp1A0A1B0GSK3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lnp1A0A1B0GSK3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lnp1A0A1B0GSK3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lnp1A0A1B0GSK3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms