Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-2A0A140T8N6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv13-2A0A140T8N6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv13-2A0A140T8N6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv13-2A0A140T8N6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.63□□□□□ -0.07
Trbv13-2A0A140T8N6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.63□□□□□ -0.07
Trbv13-2A0A140T8N6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv13-2A0A140T8N6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trbv13-2A0A140T8N6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv13-2A0A140T8N6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv13-2A0A140T8N6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv13-2A0A140T8N6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv13-2A0A140T8N6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv13-2A0A140T8N6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Gm13238-201ENSMUST00000117655 780 ntBASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv13-2A0A140T8N6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv13-2A0A140T8N6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Gm43566-201ENSMUST00000196851 808 ntBASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trbv13-2A0A140T8N6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Trbv13-2A0A140T8N6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trbv13-2A0A140T8N6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.57□□□□□ -0.08
Trbv13-2A0A140T8N6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-2A0A140T8N6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-2A0A140T8N6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-2A0A140T8N6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-2A0A140T8N6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.56□□□□□ -0.08
Trbv13-2A0A140T8N6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-2A0A140T8N6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trbv13-2A0A140T8N6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.56□□□□□ -0.08
Trbv13-2A0A140T8N6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-2A0A140T8N6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-2A0A140T8N6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms