Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-4A0A075B6B4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav6-4A0A075B6B4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-4A0A075B6B4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav6-4A0A075B6B4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-4A0A075B6B4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav6-4A0A075B6B4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-4A0A075B6B4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-4A0A075B6B4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-4A0A075B6B4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-4A0A075B6B4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-4A0A075B6B4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-4A0A075B6B4 Gm10232-201ENSMUST00000089221 720 ntBASIC16.14■□□□□ 0.17
Trav6-4A0A075B6B4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-4A0A075B6B4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav6-4A0A075B6B4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-4A0A075B6B4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms