Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12n-2A0A075B626 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12n-2A0A075B626 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.96■□□□□ 0.63
Trav12n-2A0A075B626 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12n-2A0A075B626 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Trav12n-2A0A075B626 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav12n-2A0A075B626 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12n-2A0A075B626 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12n-2A0A075B626 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12n-2A0A075B626 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12n-2A0A075B626 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12n-2A0A075B626 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trav12n-2A0A075B626 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Gm10399-202ENSMUST00000202768 748 ntBASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12n-2A0A075B626 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12n-2A0A075B626 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12n-2A0A075B626 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12n-2A0A075B626 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12n-2A0A075B626 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12n-2A0A075B626 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12n-2A0A075B626 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trav12n-2A0A075B626 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12n-2A0A075B626 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav12n-2A0A075B626 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trav12n-2A0A075B626 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12n-2A0A075B626 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12n-2A0A075B626 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav12n-2A0A075B626 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav12n-2A0A075B626 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12n-2A0A075B626 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12n-2A0A075B626 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12n-2A0A075B626 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trav12n-2A0A075B626 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav12n-2A0A075B626 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.87■□□□□ 0.61
Trav12n-2A0A075B626 Gm40881-201ENSMUST00000223397 166 ntBASIC18.87■□□□□ 0.61
Trav12n-2A0A075B626 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12n-2A0A075B626 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12n-2A0A075B626 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12n-2A0A075B626 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12n-2A0A075B626 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12n-2A0A075B626 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.86■□□□□ 0.61
Trav12n-2A0A075B626 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.86■□□□□ 0.61
Trav12n-2A0A075B626 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12n-2A0A075B626 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav12n-2A0A075B626 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12n-2A0A075B626 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12n-2A0A075B626 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12n-2A0A075B626 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav12n-2A0A075B626 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12n-2A0A075B626 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav12n-2A0A075B626 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.84■□□□□ 0.61
Trav12n-2A0A075B626 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12n-2A0A075B626 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12n-2A0A075B626 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms