Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Rsph9Q9D9V4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rsph9Q9D9V4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rsph9Q9D9V4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rsph9Q9D9V4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rsph9Q9D9V4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rsph9Q9D9V4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Rsph9Q9D9V4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rsph9Q9D9V4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.7■□□□□ 0.9
Rsph9Q9D9V4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rsph9Q9D9V4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rsph9Q9D9V4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rsph9Q9D9V4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rsph9Q9D9V4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Rsph9Q9D9V4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rsph9Q9D9V4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph9Q9D9V4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph9Q9D9V4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph9Q9D9V4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph9Q9D9V4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph9Q9D9V4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rsph9Q9D9V4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rsph9Q9D9V4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.67■□□□□ 0.9
Rsph9Q9D9V4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.67■□□□□ 0.9
Rsph9Q9D9V4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.67■□□□□ 0.9
Rsph9Q9D9V4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph9Q9D9V4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph9Q9D9V4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph9Q9D9V4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph9Q9D9V4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph9Q9D9V4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.66■□□□□ 0.9
Rsph9Q9D9V4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph9Q9D9V4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rsph9Q9D9V4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph9Q9D9V4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph9Q9D9V4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph9Q9D9V4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rsph9Q9D9V4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rsph9Q9D9V4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rsph9Q9D9V4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rsph9Q9D9V4 Gm15039-201ENSMUST00000118914 875 ntBASIC20.63■□□□□ 0.89
Rsph9Q9D9V4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph9Q9D9V4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph9Q9D9V4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph9Q9D9V4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Rsph9Q9D9V4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph9Q9D9V4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph9Q9D9V4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph9Q9D9V4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph9Q9D9V4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph9Q9D9V4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph9Q9D9V4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph9Q9D9V4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph9Q9D9V4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms