Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim33Q99PP7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Trim33Q99PP7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.9■□□□□ 0.94
Trim33Q99PP7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim33Q99PP7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim33Q99PP7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Trim33Q99PP7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim33Q99PP7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim33Q99PP7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim33Q99PP7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim33Q99PP7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim33Q99PP7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim33Q99PP7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim33Q99PP7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim33Q99PP7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.88■□□□□ 0.93
Trim33Q99PP7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim33Q99PP7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim33Q99PP7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim33Q99PP7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim33Q99PP7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim33Q99PP7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim33Q99PP7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.87■□□□□ 0.93
Trim33Q99PP7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim33Q99PP7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim33Q99PP7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim33Q99PP7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim33Q99PP7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim33Q99PP7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim33Q99PP7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim33Q99PP7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim33Q99PP7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim33Q99PP7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim33Q99PP7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim33Q99PP7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.85■□□□□ 0.93
Trim33Q99PP7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.85■□□□□ 0.93
Trim33Q99PP7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim33Q99PP7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim33Q99PP7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim33Q99PP7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim33Q99PP7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim33Q99PP7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Trim33Q99PP7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim33Q99PP7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim33Q99PP7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim33Q99PP7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim33Q99PP7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim33Q99PP7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim33Q99PP7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Trim33Q99PP7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim33Q99PP7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim33Q99PP7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim33Q99PP7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim33Q99PP7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim33Q99PP7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim33Q99PP7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim33Q99PP7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim33Q99PP7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim33Q99PP7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim33Q99PP7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
Trim33Q99PP7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim33Q99PP7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Trim33Q99PP7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim33Q99PP7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim33Q99PP7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim33Q99PP7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim33Q99PP7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim33Q99PP7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim33Q99PP7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim33Q99PP7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim33Q99PP7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim33Q99PP7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim33Q99PP7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim33Q99PP7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim33Q99PP7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim33Q99PP7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms