Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk9Q99J95 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cdk9Q99J95 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk9Q99J95 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk9Q99J95 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk9Q99J95 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk9Q99J95 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk9Q99J95 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk9Q99J95 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdk9Q99J95 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk9Q99J95 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk9Q99J95 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk9Q99J95 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk9Q99J95 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk9Q99J95 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk9Q99J95 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cdk9Q99J95 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cdk9Q99J95 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.17■□□□□ 0.98
Cdk9Q99J95 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk9Q99J95 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdk9Q99J95 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk9Q99J95 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cdk9Q99J95 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk9Q99J95 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk9Q99J95 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cdk9Q99J95 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk9Q99J95 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cdk9Q99J95 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk9Q99J95 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cdk9Q99J95 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk9Q99J95 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.15■□□□□ 0.98
Cdk9Q99J95 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk9Q99J95 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk9Q99J95 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk9Q99J95 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdk9Q99J95 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.14■□□□□ 0.98
Cdk9Q99J95 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdk9Q99J95 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdk9Q99J95 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.14■□□□□ 0.97
Cdk9Q99J95 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cdk9Q99J95 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.14■□□□□ 0.97
Cdk9Q99J95 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk9Q99J95 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk9Q99J95 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 Gm45364-201ENSMUST00000210883 159 ntBASIC21.13■□□□□ 0.97
Cdk9Q99J95 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk9Q99J95 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk9Q99J95 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk9Q99J95 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk9Q99J95 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk9Q99J95 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk9Q99J95 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk9Q99J95 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk9Q99J95 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk9Q99J95 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk9Q99J95 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk9Q99J95 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.1■□□□□ 0.97
Cdk9Q99J95 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cdk9Q99J95 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk9Q99J95 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk9Q99J95 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk9Q99J95 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk9Q99J95 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.09■□□□□ 0.97
Cdk9Q99J95 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk9Q99J95 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk9Q99J95 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk9Q99J95 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk9Q99J95 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.08■□□□□ 0.97
Cdk9Q99J95 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk9Q99J95 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk9Q99J95 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cdk9Q99J95 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cdk9Q99J95 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk9Q99J95 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cdk9Q99J95 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.07■□□□□ 0.96
Cdk9Q99J95 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cdk9Q99J95 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk9Q99J95 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk9Q99J95 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk9Q99J95 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms