Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Gm7332-201ENSMUST00000118351 454 ntBASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb4Q91XZ6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb4Q91XZ6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb4Q91XZ6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhb4Q91XZ6 Mir6538-201ENSMUST00000183713 110 ntBASIC20.94■□□□□ 0.94
Pcdhb4Q91XZ6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb4Q91XZ6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb4Q91XZ6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdhb4Q91XZ6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb4Q91XZ6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb4Q91XZ6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb4Q91XZ6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb4Q91XZ6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb4Q91XZ6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb4Q91XZ6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb4Q91XZ6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb4Q91XZ6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb4Q91XZ6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb4Q91XZ6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb4Q91XZ6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb4Q91XZ6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb4Q91XZ6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb4Q91XZ6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.91■□□□□ 0.94
Pcdhb4Q91XZ6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb4Q91XZ6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb4Q91XZ6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Gm12366-201ENSMUST00000121722 873 ntBASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Gm5786-201ENSMUST00000085368 882 ntBASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb4Q91XZ6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb4Q91XZ6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb4Q91XZ6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb4Q91XZ6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.89■□□□□ 0.93
Pcdhb4Q91XZ6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb4Q91XZ6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pcdhb4Q91XZ6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb4Q91XZ6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb4Q91XZ6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb4Q91XZ6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhb4Q91XZ6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb4Q91XZ6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb4Q91XZ6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb4Q91XZ6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb4Q91XZ6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb4Q91XZ6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb4Q91XZ6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb4Q91XZ6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb4Q91XZ6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb4Q91XZ6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb4Q91XZ6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb4Q91XZ6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb4Q91XZ6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhb4Q91XZ6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdhb4Q91XZ6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb4Q91XZ6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb4Q91XZ6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb4Q91XZ6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb4Q91XZ6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb4Q91XZ6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb4Q91XZ6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb4Q91XZ6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb4Q91XZ6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb4Q91XZ6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb4Q91XZ6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb4Q91XZ6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.83■□□□□ 0.92
Pcdhb4Q91XZ6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms