Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm13238-201ENSMUST00000117655 780 ntBASIC20.87■□□□□ 0.93
Usb1Q91W78 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Usb1Q91W78 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usb1Q91W78 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usb1Q91W78 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usb1Q91W78 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.86■□□□□ 0.93
Usb1Q91W78 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usb1Q91W78 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usb1Q91W78 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usb1Q91W78 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usb1Q91W78 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Usb1Q91W78 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usb1Q91W78 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usb1Q91W78 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usb1Q91W78 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usb1Q91W78 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usb1Q91W78 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usb1Q91W78 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.84■□□□□ 0.93
Usb1Q91W78 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usb1Q91W78 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usb1Q91W78 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.83■□□□□ 0.93
Usb1Q91W78 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usb1Q91W78 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.83■□□□□ 0.93
Usb1Q91W78 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usb1Q91W78 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usb1Q91W78 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Usb1Q91W78 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Usb1Q91W78 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usb1Q91W78 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usb1Q91W78 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usb1Q91W78 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Usb1Q91W78 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.82■□□□□ 0.92
Usb1Q91W78 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usb1Q91W78 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Usb1Q91W78 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.81■□□□□ 0.92
Usb1Q91W78 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
Usb1Q91W78 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usb1Q91W78 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Usb1Q91W78 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Usb1Q91W78 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usb1Q91W78 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Usb1Q91W78 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usb1Q91W78 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Usb1Q91W78 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usb1Q91W78 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usb1Q91W78 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.78■□□□□ 0.92
Usb1Q91W78 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usb1Q91W78 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usb1Q91W78 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usb1Q91W78 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.77■□□□□ 0.92
Usb1Q91W78 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
Usb1Q91W78 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.77■□□□□ 0.92
Usb1Q91W78 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usb1Q91W78 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usb1Q91W78 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usb1Q91W78 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.77■□□□□ 0.92
Usb1Q91W78 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usb1Q91W78 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usb1Q91W78 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usb1Q91W78 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Usb1Q91W78 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usb1Q91W78 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Usb1Q91W78 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.76■□□□□ 0.91
Usb1Q91W78 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usb1Q91W78 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usb1Q91W78 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usb1Q91W78 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usb1Q91W78 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.75■□□□□ 0.91
Usb1Q91W78 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Usb1Q91W78 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usb1Q91W78 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.75■□□□□ 0.91
Usb1Q91W78 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Usb1Q91W78 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
Usb1Q91W78 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usb1Q91W78 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Usb1Q91W78 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usb1Q91W78 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usb1Q91W78 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usb1Q91W78 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usb1Q91W78 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Usb1Q91W78 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usb1Q91W78 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usb1Q91W78 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Usb1Q91W78 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms