Protein–RNA interactions for Protein: Q8K2V1

Ppp4r1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1Q8K2V1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r1Q8K2V1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r1Q8K2V1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.6■■□□□ 1.05
Ppp4r1Q8K2V1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ppp4r1Q8K2V1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r1Q8K2V1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r1Q8K2V1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r1Q8K2V1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r1Q8K2V1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r1Q8K2V1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ppp4r1Q8K2V1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ppp4r1Q8K2V1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ppp4r1Q8K2V1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.58■■□□□ 1.05
Ppp4r1Q8K2V1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ppp4r1Q8K2V1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ppp4r1Q8K2V1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ppp4r1Q8K2V1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ppp4r1Q8K2V1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ppp4r1Q8K2V1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ppp4r1Q8K2V1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ppp4r1Q8K2V1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ppp4r1Q8K2V1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Ppp4r1Q8K2V1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ppp4r1Q8K2V1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r1Q8K2V1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r1Q8K2V1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r1Q8K2V1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r1Q8K2V1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ppp4r1Q8K2V1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.54■■□□□ 1.04
Ppp4r1Q8K2V1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ppp4r1Q8K2V1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ppp4r1Q8K2V1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ppp4r1Q8K2V1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ppp4r1Q8K2V1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ppp4r1Q8K2V1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ppp4r1Q8K2V1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ppp4r1Q8K2V1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Ppp4r1Q8K2V1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ppp4r1Q8K2V1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.52■■□□□ 1.03
Ppp4r1Q8K2V1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp4r1Q8K2V1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp4r1Q8K2V1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.5■■□□□ 1.03
Ppp4r1Q8K2V1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ppp4r1Q8K2V1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp4r1Q8K2V1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ppp4r1Q8K2V1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp4r1Q8K2V1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp4r1Q8K2V1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ppp4r1Q8K2V1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp4r1Q8K2V1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp4r1Q8K2V1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp4r1Q8K2V1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ppp4r1Q8K2V1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp4r1Q8K2V1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ppp4r1Q8K2V1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp4r1Q8K2V1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp4r1Q8K2V1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp4r1Q8K2V1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.46■■□□□ 1.03
Ppp4r1Q8K2V1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.46■■□□□ 1.03
Ppp4r1Q8K2V1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp4r1Q8K2V1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp4r1Q8K2V1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms