Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cnot3Q8K0V4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cnot3Q8K0V4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cnot3Q8K0V4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cnot3Q8K0V4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cnot3Q8K0V4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cnot3Q8K0V4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cnot3Q8K0V4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnot3Q8K0V4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnot3Q8K0V4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.8■□□□□ 0.76
Cnot3Q8K0V4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnot3Q8K0V4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnot3Q8K0V4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnot3Q8K0V4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.78■□□□□ 0.76
Cnot3Q8K0V4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnot3Q8K0V4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnot3Q8K0V4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnot3Q8K0V4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Cnot3Q8K0V4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnot3Q8K0V4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.75■□□□□ 0.75
Cnot3Q8K0V4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnot3Q8K0V4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.75■□□□□ 0.75
Cnot3Q8K0V4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnot3Q8K0V4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
Cnot3Q8K0V4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cnot3Q8K0V4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnot3Q8K0V4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cnot3Q8K0V4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Gm7432-201ENSMUST00000210343 879 ntBASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnot3Q8K0V4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnot3Q8K0V4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cnot3Q8K0V4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnot3Q8K0V4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnot3Q8K0V4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cnot3Q8K0V4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnot3Q8K0V4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnot3Q8K0V4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnot3Q8K0V4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cnot3Q8K0V4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cnot3Q8K0V4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cnot3Q8K0V4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cnot3Q8K0V4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cnot3Q8K0V4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms