Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrif1Q8CDD9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lrif1Q8CDD9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.83■□□□□ 0.93
Lrif1Q8CDD9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lrif1Q8CDD9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Lrif1Q8CDD9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lrif1Q8CDD9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lrif1Q8CDD9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Iqck-206ENSMUST00000208658 2891 ntBASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrif1Q8CDD9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrif1Q8CDD9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lrif1Q8CDD9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.81■□□□□ 0.92
Lrif1Q8CDD9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrif1Q8CDD9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lrif1Q8CDD9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.81■□□□□ 0.92
Lrif1Q8CDD9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Terc-201ENSMUST00000082862 423 ntBASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrif1Q8CDD9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Lrif1Q8CDD9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrif1Q8CDD9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrif1Q8CDD9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.76■□□□□ 0.91
Lrif1Q8CDD9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrif1Q8CDD9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrif1Q8CDD9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lrif1Q8CDD9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.76■□□□□ 0.91
Lrif1Q8CDD9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrif1Q8CDD9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Lrif1Q8CDD9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Lrif1Q8CDD9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrif1Q8CDD9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrif1Q8CDD9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Lrif1Q8CDD9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrif1Q8CDD9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lrif1Q8CDD9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrif1Q8CDD9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrif1Q8CDD9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrif1Q8CDD9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrif1Q8CDD9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrif1Q8CDD9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrif1Q8CDD9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms