Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
Scfd1Q8BRF7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Scfd1Q8BRF7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Scfd1Q8BRF7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Scfd1Q8BRF7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.45■■□□□ 1.5
Scfd1Q8BRF7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.45■■□□□ 1.5
Scfd1Q8BRF7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Gm9847-201ENSMUST00000052528 599 ntBASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Gm13241-201ENSMUST00000094493 780 ntBASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Scfd1Q8BRF7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Scfd1Q8BRF7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Scfd1Q8BRF7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Scfd1Q8BRF7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.43■■□□□ 1.5
Scfd1Q8BRF7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Scfd1Q8BRF7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
Scfd1Q8BRF7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Scfd1Q8BRF7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.42■■□□□ 1.5
Scfd1Q8BRF7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Scfd1Q8BRF7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.42■■□□□ 1.5
Scfd1Q8BRF7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Scfd1Q8BRF7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scfd1Q8BRF7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 Gm12922-201ENSMUST00000120626 809 ntBASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Scfd1Q8BRF7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Scfd1Q8BRF7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.39■■□□□ 1.5
Scfd1Q8BRF7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.39■■□□□ 1.49
Scfd1Q8BRF7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Scfd1Q8BRF7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.38■■□□□ 1.49
Scfd1Q8BRF7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Scfd1Q8BRF7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Scfd1Q8BRF7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Scfd1Q8BRF7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Scfd1Q8BRF7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Scfd1Q8BRF7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Scfd1Q8BRF7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
Scfd1Q8BRF7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Scfd1Q8BRF7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Scfd1Q8BRF7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.36■■□□□ 1.49
Scfd1Q8BRF7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.36■■□□□ 1.49
Scfd1Q8BRF7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Scfd1Q8BRF7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Scfd1Q8BRF7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.36■■□□□ 1.49
Scfd1Q8BRF7 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.36■■□□□ 1.49
Scfd1Q8BRF7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scfd1Q8BRF7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scfd1Q8BRF7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.34■■□□□ 1.49
Scfd1Q8BRF7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Scfd1Q8BRF7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scfd1Q8BRF7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scfd1Q8BRF7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Scfd1Q8BRF7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Scfd1Q8BRF7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
Scfd1Q8BRF7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Gm21956-201ENSMUST00000179946 522 ntBASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.32■■□□□ 1.48
Scfd1Q8BRF7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
Scfd1Q8BRF7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Scfd1Q8BRF7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.31■■□□□ 1.48
Scfd1Q8BRF7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scfd1Q8BRF7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scfd1Q8BRF7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Scfd1Q8BRF7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Scfd1Q8BRF7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Scfd1Q8BRF7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Scfd1Q8BRF7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms