Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VclQ64727 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VclQ64727 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VclQ64727 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.77■□□□□ 0.92
VclQ64727 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VclQ64727 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VclQ64727 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VclQ64727 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VclQ64727 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.75■□□□□ 0.91
VclQ64727 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VclQ64727 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VclQ64727 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VclQ64727 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
VclQ64727 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VclQ64727 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VclQ64727 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.73■□□□□ 0.91
VclQ64727 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.73■□□□□ 0.91
VclQ64727 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VclQ64727 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VclQ64727 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.73■□□□□ 0.91
VclQ64727 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.72■□□□□ 0.91
VclQ64727 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.72■□□□□ 0.91
VclQ64727 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VclQ64727 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.71■□□□□ 0.91
VclQ64727 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.71■□□□□ 0.91
VclQ64727 Rps24-207ENSMUST00000224568 714 ntBASIC20.71■□□□□ 0.91
VclQ64727 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VclQ64727 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
VclQ64727 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
VclQ64727 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
VclQ64727 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VclQ64727 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VclQ64727 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.69■□□□□ 0.9
VclQ64727 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.69■□□□□ 0.9
VclQ64727 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.69■□□□□ 0.9
VclQ64727 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VclQ64727 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VclQ64727 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
VclQ64727 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VclQ64727 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VclQ64727 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
VclQ64727 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VclQ64727 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VclQ64727 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms