Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scarb1Q61009 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.76■□□□□ 0.43
Scarb1Q61009 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scarb1Q61009 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scarb1Q61009 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarb1Q61009 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarb1Q61009 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.75■□□□□ 0.43
Scarb1Q61009 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarb1Q61009 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.75■□□□□ 0.43
Scarb1Q61009 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarb1Q61009 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scarb1Q61009 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarb1Q61009 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scarb1Q61009 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scarb1Q61009 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarb1Q61009 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarb1Q61009 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarb1Q61009 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.74■□□□□ 0.43
Scarb1Q61009 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarb1Q61009 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Scarb1Q61009 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarb1Q61009 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scarb1Q61009 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scarb1Q61009 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scarb1Q61009 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarb1Q61009 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarb1Q61009 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarb1Q61009 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scarb1Q61009 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.72■□□□□ 0.43
Scarb1Q61009 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Scarb1Q61009 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.72■□□□□ 0.43
Scarb1Q61009 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Scarb1Q61009 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scarb1Q61009 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarb1Q61009 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarb1Q61009 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Scarb1Q61009 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Scarb1Q61009 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scarb1Q61009 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scarb1Q61009 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Scarb1Q61009 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.71■□□□□ 0.43
Scarb1Q61009 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Scarb1Q61009 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Scarb1Q61009 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarb1Q61009 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarb1Q61009 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarb1Q61009 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Scarb1Q61009 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarb1Q61009 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.7■□□□□ 0.42
Scarb1Q61009 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scarb1Q61009 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scarb1Q61009 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarb1Q61009 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scarb1Q61009 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scarb1Q61009 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarb1Q61009 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarb1Q61009 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarb1Q61009 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Scarb1Q61009 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarb1Q61009 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scarb1Q61009 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scarb1Q61009 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.68■□□□□ 0.42
Scarb1Q61009 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.68■□□□□ 0.42
Scarb1Q61009 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.67■□□□□ 0.42
Scarb1Q61009 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scarb1Q61009 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scarb1Q61009 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scarb1Q61009 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scarb1Q61009 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scarb1Q61009 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scarb1Q61009 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scarb1Q61009 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scarb1Q61009 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.66■□□□□ 0.42
Scarb1Q61009 Gm7432-201ENSMUST00000210343 879 ntBASIC17.66■□□□□ 0.42
Scarb1Q61009 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scarb1Q61009 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Scarb1Q61009 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.66■□□□□ 0.42
Scarb1Q61009 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scarb1Q61009 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scarb1Q61009 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.65■□□□□ 0.42
Scarb1Q61009 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scarb1Q61009 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scarb1Q61009 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scarb1Q61009 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scarb1Q61009 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms