Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Lin54Q571G4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lin54Q571G4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lin54Q571G4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lin54Q571G4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lin54Q571G4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lin54Q571G4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.2■□□□□ 0.5
Lin54Q571G4 Mir3960-201ENSMUST00000198213 73 ntBASIC18.2■□□□□ 0.5
Lin54Q571G4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lin54Q571G4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin54Q571G4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin54Q571G4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lin54Q571G4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin54Q571G4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin54Q571G4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lin54Q571G4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin54Q571G4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lin54Q571G4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin54Q571G4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin54Q571G4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lin54Q571G4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin54Q571G4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lin54Q571G4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin54Q571G4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.18■□□□□ 0.5
Lin54Q571G4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.18■□□□□ 0.5
Lin54Q571G4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin54Q571G4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin54Q571G4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.17■□□□□ 0.5
Lin54Q571G4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin54Q571G4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin54Q571G4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin54Q571G4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lin54Q571G4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lin54Q571G4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Lin54Q571G4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lin54Q571G4 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.17■□□□□ 0.5
Lin54Q571G4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin54Q571G4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin54Q571G4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin54Q571G4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin54Q571G4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lin54Q571G4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.16■□□□□ 0.5
Lin54Q571G4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin54Q571G4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lin54Q571G4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lin54Q571G4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.15■□□□□ 0.5
Lin54Q571G4 Gm45364-201ENSMUST00000210883 159 ntBASIC18.15■□□□□ 0.5
Lin54Q571G4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lin54Q571G4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lin54Q571G4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lin54Q571G4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lin54Q571G4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin54Q571G4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lin54Q571G4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lin54Q571G4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin54Q571G4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lin54Q571G4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lin54Q571G4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin54Q571G4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin54Q571G4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.14■□□□□ 0.49
Lin54Q571G4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin54Q571G4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lin54Q571G4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin54Q571G4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin54Q571G4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.13■□□□□ 0.49
Lin54Q571G4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Lin54Q571G4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin54Q571G4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Lin54Q571G4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.12■□□□□ 0.49
Lin54Q571G4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lin54Q571G4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Lin54Q571G4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lin54Q571G4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Lin54Q571G4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lin54Q571G4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Lin54Q571G4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.11■□□□□ 0.49
Lin54Q571G4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.11■□□□□ 0.49
Lin54Q571G4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lin54Q571G4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lin54Q571G4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Lin54Q571G4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.1■□□□□ 0.49
Lin54Q571G4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lin54Q571G4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lin54Q571G4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms