Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LdlrP35951 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LdlrP35951 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LdlrP35951 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.02■□□□□ 0.96
LdlrP35951 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LdlrP35951 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LdlrP35951 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LdlrP35951 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LdlrP35951 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.01■□□□□ 0.95
LdlrP35951 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LdlrP35951 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LdlrP35951 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LdlrP35951 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LdlrP35951 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LdlrP35951 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LdlrP35951 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LdlrP35951 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LdlrP35951 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.99■□□□□ 0.95
LdlrP35951 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LdlrP35951 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LdlrP35951 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.99■□□□□ 0.95
LdlrP35951 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.99■□□□□ 0.95
LdlrP35951 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LdlrP35951 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LdlrP35951 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LdlrP35951 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LdlrP35951 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LdlrP35951 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LdlrP35951 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LdlrP35951 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LdlrP35951 Gm44428-201ENSMUST00000204474 874 ntBASIC20.97■□□□□ 0.95
LdlrP35951 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LdlrP35951 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LdlrP35951 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LdlrP35951 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.96■□□□□ 0.95
LdlrP35951 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LdlrP35951 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.96■□□□□ 0.95
LdlrP35951 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.96■□□□□ 0.95
LdlrP35951 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LdlrP35951 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LdlrP35951 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LdlrP35951 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LdlrP35951 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LdlrP35951 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
LdlrP35951 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LdlrP35951 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LdlrP35951 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LdlrP35951 Gm15546-201ENSMUST00000122095 826 ntBASIC20.94■□□□□ 0.94
LdlrP35951 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LdlrP35951 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LdlrP35951 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.94■□□□□ 0.94
LdlrP35951 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LdlrP35951 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LdlrP35951 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LdlrP35951 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LdlrP35951 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
LdlrP35951 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LdlrP35951 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LdlrP35951 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LdlrP35951 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LdlrP35951 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LdlrP35951 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LdlrP35951 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
LdlrP35951 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LdlrP35951 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LdlrP35951 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LdlrP35951 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LdlrP35951 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.9■□□□□ 0.94
LdlrP35951 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LdlrP35951 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LdlrP35951 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LdlrP35951 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LdlrP35951 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.89■□□□□ 0.93
LdlrP35951 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LdlrP35951 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LdlrP35951 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LdlrP35951 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LdlrP35951 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LdlrP35951 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LdlrP35951 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LdlrP35951 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.87■□□□□ 0.93
LdlrP35951 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
LdlrP35951 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LdlrP35951 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.87■□□□□ 0.93
LdlrP35951 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LdlrP35951 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LdlrP35951 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LdlrP35951 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.86■□□□□ 0.93
LdlrP35951 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LdlrP35951 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms