Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04946 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.31■□□□□ 0.52
P04946 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.31■□□□□ 0.52
P04946 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
P04946 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04946 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04946 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04946 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P04946 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P04946 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
P04946 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04946 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.3■□□□□ 0.52
P04946 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.3■□□□□ 0.52
P04946 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04946 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
P04946 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04946 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
P04946 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04946 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04946 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
P04946 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04946 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04946 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
P04946 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04946 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04946 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04946 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
P04946 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
P04946 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
P04946 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04946 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04946 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04946 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P04946 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04946 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.28■□□□□ 0.52
P04946 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04946 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04946 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.27■□□□□ 0.52
P04946 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
P04946 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04946 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.27■□□□□ 0.52
P04946 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
P04946 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04946 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04946 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04946 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
P04946 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
P04946 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
P04946 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04946 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04946 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P04946 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.26■□□□□ 0.51
P04946 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P04946 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.26■□□□□ 0.51
P04946 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P04946 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
P04946 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.25■□□□□ 0.51
P04946 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04946 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04946 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P04946 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
P04946 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04946 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
P04946 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.23■□□□□ 0.51
P04946 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04946 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04946 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04946 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04946 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
P04946 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.22■□□□□ 0.51
P04946 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04946 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
P04946 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
P04946 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P04946 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04946 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
P04946 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04946 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04946 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04946 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
P04946 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
P04946 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms